Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MRPL53P1-201ENST00000414323 319 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.66□□□□□ -1.5
LIMK2P53671 SNRPCP3-201ENST00000474888 476 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 RPS17P15-201ENST00000475609 349 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.66□□□□□ -1.5
LIMK2P53671 AC112184.1-201ENST00000505179 312 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK2P53671 AC074087.1-201ENST00000512059 724 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 RNA5SP362-201ENST00000516048 118 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.66□□□□□ -1.5
LIMK2P53671 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK2P53671 AC122688.1-201ENST00000541494 223 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK2P53671 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 MIR4505-201ENST00000582238 73 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK2P53671 AC125494.2-201ENST00000602431 657 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 AC104695.2-201ENST00000605056 775 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK2P53671 AC021766.1-201ENST00000624404 741 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LIMK2P53671 AC022919.1-201ENST00000624979 626 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK2P53671 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.66□□□□□ -1.5
LIMK2P53671 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK2P53671 AC016745.2-201ENST00000608834 3443 ntBASIC5.66□□□□□ -1.5
LIMK2P53671 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.66□□□□□ -1.5
LIMK2P53671 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LIMK2P53671 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK2P53671 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 CR788268.1-201ENST00000603931 1809 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK2P53671 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
LIMK2P53671 SNORA11B-201ENST00000408175 129 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 OR3A2-201ENST00000408891 1076 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AL133482.1-201ENST00000415988 498 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 BMS1P17-202ENST00000416720 316 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK2P53671 NANOGP9-201ENST00000439890 892 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK2P53671 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LIMK2P53671 NPM1P19-201ENST00000450070 712 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK2P53671 SEPT14P1-201ENST00000458703 648 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 RNU7-157P-201ENST00000459600 66 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.65□□□□□ -1.5
LIMK2P53671 AC105420.1-201ENST00000504389 582 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.65□□□□□ -1.5
LIMK2P53671 AC109481.1-201ENST00000509173 282 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 RN7SKP253-201ENST00000516424 309 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 FO393422.1-201ENST00000603908 708 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AL139124.1-201ENST00000609123 421 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK2P53671 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AP003400.2-201ENST00000624036 666 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.65□□□□□ -1.5
LIMK2P53671 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.65□□□□□ -1.5
LIMK2P53671 AC087565.3-203ENST00000641018 837 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 AC104964.3-201ENST00000606115 2860 ntBASIC5.65□□□□□ -1.5
LIMK2P53671 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
LIMK2P53671 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.65□□□□□ -1.51
LIMK2P53671 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.65□□□□□ -1.51
LIMK2P53671 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
LIMK2P53671 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LIMK2P53671 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LIMK2P53671 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LIMK2P53671 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LIMK2P53671 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIMK2P53671 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LIMK2P53671 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
LIMK2P53671 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms