Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC016397.1-201ENST00000412463 242 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 FABP5P2-201ENST00000439042 408 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 TPT1P13-201ENST00000449760 499 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 RPS3AP41-201ENST00000462701 778 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 AC090114.3-201ENST00000479267 829 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.52□□□□□ -1.53
CXCL12P48061 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 AC090527.3-201ENST00000619041 548 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 PANDAR-201ENST00000629595 1506 ntBASIC5.52□□□□□ -1.53
CXCL12P48061 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CXCL12P48061 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CXCL12P48061 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.52□□□□□ -1.53
CXCL12P48061 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CXCL12P48061 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CXCL12P48061 SNORA16A-201ENST00000384342 137 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 FABP12P1-201ENST00000401911 322 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 AC104837.2-201ENST00000427236 424 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.51□□□□□ -1.53
CXCL12P48061 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 GSTM5P1-201ENST00000434751 660 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 SETP4-201ENST00000455717 868 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 AC105420.1-201ENST00000504389 582 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.51□□□□□ -1.53
CXCL12P48061 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.51□□□□□ -1.53
CXCL12P48061 AC244502.2-201ENST00000543361 851 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 H3F3BP2-201ENST00000583907 357 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 AC011447.4-201ENST00000587562 111 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.51□□□□□ -1.53
CXCL12P48061 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.51□□□□□ -1.53
CXCL12P48061 AC114876.1-201ENST00000490962 1366 ntBASIC5.51□□□□□ -1.53
CXCL12P48061 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.51□□□□□ -1.53
CXCL12P48061 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
CXCL12P48061 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.51□□□□□ -1.53
CXCL12P48061 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CXCL12P48061 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CXCL12P48061 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CXCL12P48061 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CXCL12P48061 AP003170.5-201ENST00000397185 335 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 RN7SKP126-201ENST00000411143 300 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 RAB28P1-201ENST00000411517 641 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 AL672138.1-201ENST00000450604 1015 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.5□□□□□ -1.53
CXCL12P48061 AL035690.1-201ENST00000490892 383 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 RPS4XP20-201ENST00000505751 772 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 MTND6P2-201ENST00000512226 524 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC078899.1-201ENST00000521432 1185 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.5□□□□□ -1.53
CXCL12P48061 AC127381.1-201ENST00000555979 939 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AL163952.1-202ENST00000569625 600 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 MIR4330-201ENST00000579077 105 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC006115.2-201ENST00000596823 202 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC087283.1-201ENST00000604029 1074 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC099494.2-201ENST00000623371 978 ntBASIC5.5□□□□□ -1.53
CXCL12P48061 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CXCL12P48061 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CXCL12P48061 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CXCL12P48061 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CXCL12P48061 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.5□□□□□ -1.53
CXCL12P48061 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms