Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC006530.1-201ENST00000555980 571 ntBASIC6.05□□□□□ -1.44
SSR1P43307 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.05□□□□□ -1.44
SSR1P43307 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.05□□□□□ -1.44
SSR1P43307 AP002884.5-201ENST00000595053 1132 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AL136131.3-201ENST00000607600 188 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AC244100.4-201ENST00000617747 388 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 AC114774.1-201ENST00000507410 1770 ntBASIC6.05□□□□□ -1.44
SSR1P43307 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.05□□□□□ -1.44
SSR1P43307 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.05□□□□□ -1.44
SSR1P43307 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSR1P43307 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 Z95331.1-201ENST00000623075 23112 ntBASIC6.04□□□□□ -1.44
SSR1P43307 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSR1P43307 TMSB4XP2-201ENST00000335179 210 ntBASIC6.04□□□□□ -1.44
SSR1P43307 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 NPM1P40-201ENST00000412758 733 ntBASIC6.04□□□□□ -1.44
SSR1P43307 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.04□□□□□ -1.44
SSR1P43307 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.04□□□□□ -1.44
SSR1P43307 EIF5AP4-201ENST00000441206 465 ntBASIC6.04□□□□□ -1.44
SSR1P43307 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.04□□□□□ -1.44
SSR1P43307 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 RPS6P2-201ENST00000454208 705 ntBASIC6.04□□□□□ -1.44
SSR1P43307 ABCC13-202ENST00000463099 3842 ntBASIC6.04□□□□□ -1.44
SSR1P43307 NIP7P2-201ENST00000485801 544 ntBASIC6.04□□□□□ -1.44
SSR1P43307 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 RN7SL346P-201ENST00000491561 294 ntBASIC6.04□□□□□ -1.44
SSR1P43307 EIF4E2P2-201ENST00000492033 736 ntBASIC6.04□□□□□ -1.44
SSR1P43307 USP9YP2-201ENST00000504503 1000 ntBASIC6.04□□□□□ -1.44
SSR1P43307 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.04□□□□□ -1.44
SSR1P43307 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.04□□□□□ -1.44
SSR1P43307 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 USP9YP1-201ENST00000513521 1002 ntBASIC6.04□□□□□ -1.44
SSR1P43307 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.04□□□□□ -1.44
SSR1P43307 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.04□□□□□ -1.44
SSR1P43307 CYCSP38-201ENST00000559840 322 ntBASIC6.04□□□□□ -1.44
SSR1P43307 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 AC079776.5-201ENST00000641920 211 ntBASIC6.04□□□□□ -1.44
SSR1P43307 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSR1P43307 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSR1P43307 PDZK1P1-202ENST00000425209 1350 ntBASIC6.04□□□□□ -1.44
SSR1P43307 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSR1P43307 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.03□□□□□ -1.44
SSR1P43307 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSR1P43307 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
SSR1P43307 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.03□□□□□ -1.44
SSR1P43307 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.03□□□□□ -1.44
SSR1P43307 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSR1P43307 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSR1P43307 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSR1P43307 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSR1P43307 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SSR1P43307 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.03□□□□□ -1.44
SSR1P43307 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSR1P43307 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SSR1P43307 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.03□□□□□ -1.44
SSR1P43307 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.03□□□□□ -1.44
SSR1P43307 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.03□□□□□ -1.44
SSR1P43307 RPS23P2-201ENST00000463671 415 ntBASIC6.03□□□□□ -1.44
SSR1P43307 AL122020.1-201ENST00000472287 459 ntBASIC6.03□□□□□ -1.44
SSR1P43307 RPL9P15-201ENST00000491096 532 ntBASIC6.03□□□□□ -1.44
SSR1P43307 RN7SL193P-201ENST00000491708 276 ntBASIC6.03□□□□□ -1.44
SSR1P43307 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.03□□□□□ -1.44
SSR1P43307 OR5H7P-201ENST00000514084 930 ntBASIC6.03□□□□□ -1.44
SSR1P43307 AC021146.10-201ENST00000515628 706 ntBASIC6.03□□□□□ -1.44
SSR1P43307 SCARNA18.1-201ENST00000516330 83 ntBASIC6.03□□□□□ -1.44
SSR1P43307 Vault.2-201ENST00000516519 98 ntBASIC6.03□□□□□ -1.44
SSR1P43307 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.03□□□□□ -1.44
SSR1P43307 AC091078.2-201ENST00000557145 559 ntBASIC6.03□□□□□ -1.44
SSR1P43307 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.03□□□□□ -1.44
SSR1P43307 MIR3936-201ENST00000584304 110 ntBASIC6.03□□□□□ -1.44
SSR1P43307 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.03□□□□□ -1.44
SSR1P43307 MIR6780B-201ENST00000610307 79 ntBASIC6.03□□□□□ -1.44
SSR1P43307 MIR6793-201ENST00000612376 63 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms