Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.39□□□□□ -1.39
CIITAP33076 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.39□□□□□ -1.39
CIITAP33076 YWHAEP1-201ENST00000453697 763 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC128716.1-201ENST00000475129 166 ntBASIC6.39□□□□□ -1.39
CIITAP33076 MTND3P3-201ENST00000505004 126 ntBASIC6.39□□□□□ -1.39
CIITAP33076 ST13P12-201ENST00000508958 1094 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC109481.1-201ENST00000509173 282 ntBASIC6.39□□□□□ -1.39
CIITAP33076 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 AC137627.1-201ENST00000545761 289 ntBASIC6.39□□□□□ -1.39
CIITAP33076 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CIITAP33076 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 AC009962.1-201ENST00000567327 3813 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.39□□□□□ -1.39
CIITAP33076 SNORD95-201ENST00000579879 68 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.39□□□□□ -1.39
CIITAP33076 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.39□□□□□ -1.39
CIITAP33076 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 AL583832.1-201ENST00000603227 784 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC104695.2-201ENST00000605056 775 ntBASIC6.39□□□□□ -1.39
CIITAP33076 KATNBL1P1-201ENST00000605192 748 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 AC024933.1-201ENST00000608472 348 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AL138960.1-201ENST00000613838 513 ntBASIC6.39□□□□□ -1.39
CIITAP33076 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.39□□□□□ -1.39
CIITAP33076 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 PWAR1-201ENST00000624188 2414 ntBASIC6.39□□□□□ -1.39
CIITAP33076 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 AC093909.5-201ENST00000621839 1799 ntBASIC6.39□□□□□ -1.39
CIITAP33076 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 METTL15P3-201ENST00000415522 1221 ntBASIC6.38□□□□□ -1.39
CIITAP33076 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 AL133173.1-201ENST00000423458 397 ntBASIC6.38□□□□□ -1.39
CIITAP33076 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.38□□□□□ -1.39
CIITAP33076 AP000547.1-201ENST00000454360 617 ntBASIC6.38□□□□□ -1.39
CIITAP33076 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 RN7SL174P-201ENST00000475578 289 ntBASIC6.38□□□□□ -1.39
CIITAP33076 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.38□□□□□ -1.39
CIITAP33076 RN7SKP253-201ENST00000516424 309 ntBASIC6.38□□□□□ -1.39
CIITAP33076 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.38□□□□□ -1.39
CIITAP33076 AC007423.1-201ENST00000605009 627 ntBASIC6.38□□□□□ -1.39
CIITAP33076 MIR6862-1-201ENST00000613016 70 ntBASIC6.38□□□□□ -1.39
CIITAP33076 MIR6862-2-201ENST00000614755 70 ntBASIC6.38□□□□□ -1.39
CIITAP33076 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.38□□□□□ -1.39
CIITAP33076 AC091948.2-201ENST00000636510 279 ntBASIC6.38□□□□□ -1.39
CIITAP33076 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.38□□□□□ -1.39
CIITAP33076 AL139254.3-201ENST00000641097 674 ntBASIC6.38□□□□□ -1.39
CIITAP33076 KYNUP3-201ENST00000574386 1341 ntBASIC6.38□□□□□ -1.39
CIITAP33076 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.38□□□□□ -1.39
CIITAP33076 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CIITAP33076 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.38□□□□□ -1.39
CIITAP33076 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CIITAP33076 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 RNA5SP514-201ENST00000363717 111 ntBASIC6.37□□□□□ -1.39
CIITAP33076 MIR143-201ENST00000385300 106 ntBASIC6.37□□□□□ -1.39
CIITAP33076 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 NACAP7-201ENST00000407371 609 ntBASIC6.37□□□□□ -1.39
CIITAP33076 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.37□□□□□ -1.39
CIITAP33076 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.37□□□□□ -1.39
CIITAP33076 AL356806.1-201ENST00000422524 916 ntBASIC6.37□□□□□ -1.39
CIITAP33076 TNPO1P1-201ENST00000423641 1138 ntBASIC6.37□□□□□ -1.39
CIITAP33076 AL590399.2-201ENST00000427536 309 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms