Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.1□□□□□ -1.43
COL11A1P12107 SETP3-201ENST00000581726 813 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.1□□□□□ -1.43
COL11A1P12107 MIR7703-201ENST00000620784 77 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 MIR6810-201ENST00000622701 70 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.1□□□□□ -1.43
COL11A1P12107 AC016745.2-201ENST00000608834 3443 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL11A1P12107 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL11A1P12107 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.09□□□□□ -1.43
COL11A1P12107 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL11A1P12107 RNA5SP305-201ENST00000362665 119 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL11A1P12107 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.09□□□□□ -1.43
COL11A1P12107 RPL7P56-201ENST00000429441 717 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 RN7SKP147-201ENST00000517154 244 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.09□□□□□ -1.43
COL11A1P12107 YWHABP2-201ENST00000540201 713 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL11A1P12107 AC005377.1-201ENST00000605126 456 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 AC015712.7-201ENST00000615211 635 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 AC003973.3-201ENST00000624863 2822 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL11A1P12107 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
COL11A1P12107 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL11A1P12107 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL11A1P12107 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.09□□□□□ -1.43
COL11A1P12107 OR9K1P-202ENST00000641111 3217 ntBASIC6.09□□□□□ -1.43
COL11A1P12107 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL11A1P12107 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL11A1P12107 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
COL11A1P12107 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
COL11A1P12107 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL11A1P12107 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL11A1P12107 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL11A1P12107 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.09□□□□□ -1.44
COL11A1P12107 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.09□□□□□ -1.44
COL11A1P12107 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL11A1P12107 Z92846.1-201ENST00000456203 268 ntBASIC6.09□□□□□ -1.44
COL11A1P12107 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.09□□□□□ -1.44
COL11A1P12107 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL11A1P12107 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.09□□□□□ -1.44
COL11A1P12107 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.09□□□□□ -1.44
COL11A1P12107 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.09□□□□□ -1.44
COL11A1P12107 AP001357.1-201ENST00000586304 1053 ntBASIC6.09□□□□□ -1.44
COL11A1P12107 AC005252.1-201ENST00000604518 1063 ntBASIC6.09□□□□□ -1.44
COL11A1P12107 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.09□□□□□ -1.44
COL11A1P12107 AC244107.2-201ENST00000611773 76 ntBASIC6.09□□□□□ -1.44
COL11A1P12107 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
COL11A1P12107 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL11A1P12107 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 AL158152.1-201ENST00000602652 1435 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 AC100757.1-201ENST00000616872 1835 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
COL11A1P12107 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 AC107980.1-201ENST00000558671 3355 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.08□□□□□ -1.44
COL11A1P12107 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.08□□□□□ -1.44
COL11A1P12107 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 CASC19-281ENST00000642118 1554 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.08□□□□□ -1.44
COL11A1P12107 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 RPL37P18-201ENST00000411602 243 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC093162.1-201ENST00000419682 124 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 RPA2P2-201ENST00000419698 796 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.08□□□□□ -1.44
COL11A1P12107 AL360081.1-201ENST00000428299 555 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.08□□□□□ -1.44
COL11A1P12107 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.08□□□□□ -1.44
COL11A1P12107 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 AC130364.2-201ENST00000528639 604 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.08□□□□□ -1.44
COL11A1P12107 AC009237.13-201ENST00000603193 276 ntBASIC6.08□□□□□ -1.44
COL11A1P12107 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL11A1P12107 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL11A1P12107 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL11A1P12107 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.08□□□□□ -1.44
COL11A1P12107 NXF4-202ENST00000416098 1465 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms