Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.71□□□□□ -1.5
PCNAP12004 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.71□□□□□ -1.5
PCNAP12004 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.71□□□□□ -1.5
PCNAP12004 CKS1BP1-201ENST00000555221 240 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 AC007346.2-201ENST00000564816 892 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.71□□□□□ -1.5
PCNAP12004 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.71□□□□□ -1.5
PCNAP12004 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PCNAP12004 AL671309.1-201ENST00000603750 544 ntBASIC5.71□□□□□ -1.5
PCNAP12004 MIR6806-201ENST00000622141 64 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AP003499.2-201ENST00000624100 483 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AL683826.1-201ENST00000624104 627 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC021766.1-201ENST00000624404 741 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AP001052.1-201ENST00000626421 99 ntBASIC5.71□□□□□ -1.5
PCNAP12004 AC106858.1-201ENST00000637497 429 ntBASIC5.71□□□□□ -1.5
PCNAP12004 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 OR10AB1P-202ENST00000641219 1686 ntBASIC5.71□□□□□ -1.5
PCNAP12004 RBPJP7-201ENST00000442803 1447 ntBASIC5.71□□□□□ -1.5
PCNAP12004 RBPJP5-201ENST00000449433 1447 ntBASIC5.71□□□□□ -1.5
PCNAP12004 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PCNAP12004 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.71□□□□□ -1.5
PCNAP12004 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCNAP12004 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 AC130304.1-201ENST00000622942 2385 ntBASIC5.71□□□□□ -1.5
PCNAP12004 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 SSXP3-201ENST00000442971 1300 ntBASIC5.71□□□□□ -1.5
PCNAP12004 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCNAP12004 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PCNAP12004 AC027228.2-201ENST00000567141 2154 ntBASIC5.7□□□□□ -1.5
PCNAP12004 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.7□□□□□ -1.5
PCNAP12004 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.7□□□□□ -1.5
PCNAP12004 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.7□□□□□ -1.5
PCNAP12004 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCNAP12004 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 AL356057.1-202ENST00000402263 756 ntBASIC5.7□□□□□ -1.5
PCNAP12004 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.7□□□□□ -1.5
PCNAP12004 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.7□□□□□ -1.5
PCNAP12004 AC073410.1-201ENST00000435125 589 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AL445928.1-201ENST00000435545 222 ntBASIC5.7□□□□□ -1.5
PCNAP12004 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.7□□□□□ -1.5
PCNAP12004 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.7□□□□□ -1.5
PCNAP12004 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 AC097463.1-201ENST00000447288 481 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC118758.1-202ENST00000454719 225 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 AC092865.4-201ENST00000477936 615 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 PRMT5P1-201ENST00000514351 598 ntBASIC5.7□□□□□ -1.5
PCNAP12004 HSD3BP3-201ENST00000514706 994 ntBASIC5.7□□□□□ -1.5
PCNAP12004 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC084121.1-201ENST00000533882 835 ntBASIC5.7□□□□□ -1.5
PCNAP12004 CR383656.14-201ENST00000551951 406 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC093591.2-201ENST00000565254 3843 ntBASIC5.7□□□□□ -1.5
PCNAP12004 GARSP1-201ENST00000570895 719 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 AP001496.3-201ENST00000580230 913 ntBASIC5.7□□□□□ -1.5
PCNAP12004 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 AC025857.2-201ENST00000602711 238 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 AL451049.1-201ENST00000608672 497 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC092266.1-201ENST00000610958 165 ntBASIC5.7□□□□□ -1.5
PCNAP12004 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCNAP12004 AC079298.2-201ENST00000623885 459 ntBASIC5.7□□□□□ -1.5
PCNAP12004 AC093225.1-201ENST00000506867 1408 ntBASIC5.7□□□□□ -1.5
PCNAP12004 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PCNAP12004 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.7□□□□□ -1.5
PCNAP12004 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.7□□□□□ -1.5
PCNAP12004 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCNAP12004 BCORP1-203ENST00000513194 5093 ntBASIC5.7□□□□□ -1.5
PCNAP12004 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PCNAP12004 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PCNAP12004 HSPA8P14-201ENST00000552265 1805 ntBASIC5.69□□□□□ -1.5
PCNAP12004 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
PCNAP12004 AC083899.2-201ENST00000423285 1376 ntBASIC5.69□□□□□ -1.5
PCNAP12004 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PCNAP12004 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PCNAP12004 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCNAP12004 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCNAP12004 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCNAP12004 RNU6-1176P-201ENST00000390955 107 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms