Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX3O60493 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX3O60493 AC073869.8-201ENST00000641806 335 ntBASIC5.42□□□□□ -1.54
SNX3O60493 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX3O60493 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX3O60493 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX3O60493 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX3O60493 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX3O60493 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SNX3O60493 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SNX3O60493 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SNX3O60493 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SNX3O60493 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX3O60493 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 ICE2P1-201ENST00000512800 1849 ntBASIC5.41□□□□□ -1.54
SNX3O60493 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 AL360270.2-201ENST00000562952 5985 ntBASIC5.41□□□□□ -1.54
SNX3O60493 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNX3O60493 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX3O60493 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
SNX3O60493 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 AC217777.1-201ENST00000570034 1471 ntBASIC5.41□□□□□ -1.54
SNX3O60493 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX3O60493 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX3O60493 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNX3O60493 AL009179.1-201ENST00000406085 265 ntBASIC5.41□□□□□ -1.54
SNX3O60493 NACAP7-201ENST00000407371 609 ntBASIC5.41□□□□□ -1.54
SNX3O60493 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX3O60493 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 HMGN1P32-201ENST00000441744 256 ntBASIC5.41□□□□□ -1.54
SNX3O60493 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX3O60493 AC015524.1-201ENST00000491585 472 ntBASIC5.41□□□□□ -1.54
SNX3O60493 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 AC134698.1-201ENST00000511619 643 ntBASIC5.41□□□□□ -1.54
SNX3O60493 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
SNX3O60493 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX3O60493 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX3O60493 HSPE1P2-201ENST00000554777 306 ntBASIC5.41□□□□□ -1.54
SNX3O60493 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX3O60493 AC022884.2-201ENST00000578535 580 ntBASIC5.41□□□□□ -1.54
SNX3O60493 AP005119.1-201ENST00000580956 292 ntBASIC5.41□□□□□ -1.54
SNX3O60493 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
SNX3O60493 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.41□□□□□ -1.54
SNX3O60493 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.41□□□□□ -1.54
SNX3O60493 MIR6839-201ENST00000620425 113 ntBASIC5.41□□□□□ -1.54
SNX3O60493 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 PSG10P-201ENST00000501199 1500 ntBASIC5.41□□□□□ -1.54
SNX3O60493 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNX3O60493 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX3O60493 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SNX3O60493 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX3O60493 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX3O60493 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX3O60493 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX3O60493 RNU6-670P-201ENST00000364312 104 ntBASIC5.4□□□□□ -1.54
SNX3O60493 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX3O60493 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX3O60493 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 AL359643.1-201ENST00000404109 423 ntBASIC5.4□□□□□ -1.54
SNX3O60493 RN7SKP16-201ENST00000410180 299 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AL356968.2-201ENST00000412769 1257 ntBASIC5.4□□□□□ -1.54
SNX3O60493 NFU1P1-201ENST00000413128 774 ntBASIC5.4□□□□□ -1.54
SNX3O60493 RPS6P23-201ENST00000413224 722 ntBASIC5.4□□□□□ -1.54
SNX3O60493 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 NENFP1-201ENST00000419476 466 ntBASIC5.4□□□□□ -1.54
SNX3O60493 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX3O60493 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SNX3O60493 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX3O60493 MTND6P5-201ENST00000448266 512 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AL450023.1-201ENST00000450868 751 ntBASIC5.4□□□□□ -1.54
SNX3O60493 PPIAP7-201ENST00000454070 489 ntBASIC5.4□□□□□ -1.54
SNX3O60493 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SNX3O60493 RPL31P53-201ENST00000457065 348 ntBASIC5.4□□□□□ -1.54
SNX3O60493 RPS24P16-201ENST00000497294 392 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX3O60493 SNORA70.17-201ENST00000516449 133 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX3O60493 IGLV3-30-201ENST00000524362 298 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AP000620.1-201ENST00000527147 504 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX3O60493 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX3O60493 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX3O60493 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX3O60493 OR1E3-201ENST00000575608 948 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX3O60493 AC068768.2-201ENST00000602352 343 ntBASIC5.4□□□□□ -1.54
SNX3O60493 AC073333.2-201ENST00000603589 769 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms