Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.43□□□□□ -1.54
PDLIM1O00151 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AP001273.1-201ENST00000624493 3152 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
PDLIM1O00151 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDLIM1O00151 RPL10P10-201ENST00000403509 664 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AL133482.1-201ENST00000415988 498 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC104843.2-201ENST00000427666 297 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM1O00151 AL450263.2-201ENST00000439400 589 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM1O00151 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 AC016027.4-201ENST00000450866 277 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 OR52E3P-201ENST00000452083 936 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC002553.3-201ENST00000453002 341 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM1O00151 CR383658.1-201ENST00000514609 734 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC021146.10-201ENST00000515628 706 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM1O00151 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.43□□□□□ -1.54
PDLIM1O00151 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 AC040958.1-201ENST00000561102 201 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC134669.1-201ENST00000581275 672 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 RN7SL435P-201ENST00000584418 282 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 AC096861.1-201ENST00000616652 240 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 FAM27E2-201ENST00000619668 403 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 HSPD1P9-201ENST00000420325 1636 ntBASIC5.43□□□□□ -1.54
PDLIM1O00151 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PDLIM1O00151 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM1O00151 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 KARSP1-201ENST00000451871 1752 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 MFSD8-219ENST00000641228 2559 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 RNU1-136P-201ENST00000384181 164 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 SNORA51.9-201ENST00000384295 124 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM1O00151 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 VN1R12P-201ENST00000403778 876 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC099677.3-201ENST00000427081 395 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 PSMD10P2-201ENST00000432890 672 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 TMX2P1-201ENST00000436507 708 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AC023141.3-201ENST00000436698 278 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 RPL5P16-201ENST00000471467 790 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AC090638.1-201ENST00000498296 909 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 MTCO3P42-201ENST00000509488 518 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 MTCO3P39-201ENST00000514812 518 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 RN7SKP35-201ENST00000517210 151 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM1O00151 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.42□□□□□ -1.54
PDLIM1O00151 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM1O00151 AC092332.1-201ENST00000563684 829 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AC002310.3-201ENST00000569728 723 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AL499605.1-201ENST00000604628 403 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 AL512652.1-201ENST00000619006 500 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 CASC19-204ENST00000641001 2055 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM1O00151 CR383656.5-201ENST00000547616 1340 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM1O00151 MAPK10-349ENST00000641767 3661 ntBASIC5.42□□□□□ -1.54
PDLIM1O00151 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM1O00151 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM1O00151 AL592182.3-201ENST00000642132 3304 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms