Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.25□□□□□ -1.41
DDX39AO00148 RN7SL177P-201ENST00000476596 299 ntBASIC6.25□□□□□ -1.41
DDX39AO00148 RN7SL629P-201ENST00000489622 285 ntBASIC6.25□□□□□ -1.41
DDX39AO00148 PMS2P3-207ENST00000529061 717 ntBASIC6.25□□□□□ -1.41
DDX39AO00148 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 AP005403.1-201ENST00000579720 229 ntBASIC6.25□□□□□ -1.41
DDX39AO00148 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.25□□□□□ -1.41
DDX39AO00148 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 AL353729.2-201ENST00000605859 1249 ntBASIC6.25□□□□□ -1.41
DDX39AO00148 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.25□□□□□ -1.41
DDX39AO00148 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.25□□□□□ -1.41
DDX39AO00148 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.25□□□□□ -1.41
DDX39AO00148 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.25□□□□□ -1.41
DDX39AO00148 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
DDX39AO00148 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
DDX39AO00148 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
DDX39AO00148 KYNUP3-201ENST00000574386 1341 ntBASIC6.25□□□□□ -1.41
DDX39AO00148 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.24□□□□□ -1.41
DDX39AO00148 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.24□□□□□ -1.41
DDX39AO00148 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.24□□□□□ -1.41
DDX39AO00148 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 BCORP1-203ENST00000513194 5093 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.24□□□□□ -1.41
DDX39AO00148 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.24□□□□□ -1.41
DDX39AO00148 RN7SKP6-201ENST00000364795 319 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
DDX39AO00148 RNU1-136P-201ENST00000384181 164 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 MIR551A-201ENST00000385042 96 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
DDX39AO00148 MARK2P12-201ENST00000420129 585 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 RNGTTP1-201ENST00000420965 728 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.24□□□□□ -1.41
DDX39AO00148 CYCSP6-201ENST00000434498 302 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 BTG3P1-201ENST00000435859 716 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 AC092106.1-201ENST00000444291 373 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.24□□□□□ -1.41
DDX39AO00148 RPS4XP1-201ENST00000482189 787 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.24□□□□□ -1.41
DDX39AO00148 BX510359.5-201ENST00000515651 304 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.24□□□□□ -1.41
DDX39AO00148 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.24□□□□□ -1.41
DDX39AO00148 AC060780.2-201ENST00000589047 198 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 FKBP1AP1-201ENST00000594588 318 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 NANOGP3-201ENST00000605855 286 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 AC021766.1-201ENST00000624404 741 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 AC011503.2-201ENST00000594230 1500 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
DDX39AO00148 AC092111.2-201ENST00000611627 1414 ntBASIC6.24□□□□□ -1.41
DDX39AO00148 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
DDX39AO00148 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
DDX39AO00148 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
DDX39AO00148 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.23□□□□□ -1.41
DDX39AO00148 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
DDX39AO00148 AL442128.2-201ENST00000620246 1824 ntBASIC6.23□□□□□ -1.41
DDX39AO00148 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
DDX39AO00148 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.23□□□□□ -1.41
DDX39AO00148 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
DDX39AO00148 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.23□□□□□ -1.41
DDX39AO00148 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
DDX39AO00148 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
DDX39AO00148 AC087516.1-201ENST00000561236 2428 ntBASIC6.23□□□□□ -1.41
DDX39AO00148 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
DDX39AO00148 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
DDX39AO00148 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.23□□□□□ -1.41
DDX39AO00148 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.23□□□□□ -1.41
DDX39AO00148 BX510359.3-201ENST00000422168 306 ntBASIC6.23□□□□□ -1.41
DDX39AO00148 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.23□□□□□ -1.41
DDX39AO00148 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.23□□□□□ -1.41
DDX39AO00148 KRT8P51-201ENST00000438938 274 ntBASIC6.23□□□□□ -1.41
DDX39AO00148 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.23□□□□□ -1.41
DDX39AO00148 SPRYD7P1-201ENST00000443861 570 ntBASIC6.23□□□□□ -1.41
DDX39AO00148 OR52Y1P-201ENST00000452418 828 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms