Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 RPL9P15-201ENST00000491096 532 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AL117692.1-201ENST00000494283 713 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 SETP12-201ENST00000514068 805 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 RNA5SP340-201ENST00000517132 107 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AL358913.1-201ENST00000554342 121 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 RPA2P1-201ENST00000556557 721 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 MIR4776-2-201ENST00000580204 80 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC090236.2-201ENST00000587933 1101 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC015849.2-201ENST00000605738 409 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AP001437.1-201ENST00000608783 456 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC022400.9-201ENST00000623633 273 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC079298.2-201ENST00000623885 459 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 UGT2B26P-201ENST00000508672 1613 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SRRM4A7MD48 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 AP002512.4-202ENST00000641599 4530 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.67□□□□□ -1.66
SRRM4A7MD48 MTCO1P15-201ENST00000529569 1526 ntBASIC4.67□□□□□ -1.66
SRRM4A7MD48 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 MT-RNR2-201ENST00000387347 1559 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 SNORD51.1-201ENST00000365405 77 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 RPL11P3-201ENST00000395256 523 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 RN7SKP29-201ENST00000410957 272 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC009506.2-201ENST00000420635 840 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 RPS26P4-201ENST00000431743 355 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC242426.1-201ENST00000435270 960 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 TUBB4BP6-201ENST00000437576 479 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 VN1R110P-201ENST00000438988 971 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 CFL1P4-201ENST00000451536 498 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 PPIAP27-201ENST00000453800 265 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 CST12P-201ENST00000457644 362 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 RPSAP37-201ENST00000470913 821 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 RN7SL193P-201ENST00000491708 276 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC021087.2-201ENST00000504656 1203 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC105384.2-201ENST00000508433 640 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC021146.7-201ENST00000509604 775 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 RN7SKP183-201ENST00000517169 324 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 IGLV3-30-201ENST00000524362 298 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC023310.2-201ENST00000553844 547 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC006530.1-201ENST00000555980 571 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC008507.3-201ENST00000585753 472 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 HIRAP1-201ENST00000605318 787 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.66□□□□□ -1.66
SRRM4A7MD48 AL359091.2-201ENST00000609303 556 ntBASIC4.66□□□□□ -1.66
SRRM4A7MD48 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRRM4A7MD48 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms