Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 MTCO1P51-201ENST00000427672 1060 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC092447.2-201ENST00000435487 669 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC010086.1-201ENST00000437359 1052 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 TUBB4BP6-201ENST00000437576 479 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 IGBP1P3-201ENST00000447449 1000 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SL515P-201ENST00000463999 297 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SL502P-201ENST00000481857 290 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SL267P-201ENST00000485107 261 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC015524.1-201ENST00000491585 472 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC098976.1-201ENST00000513014 541 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 MAST4-IT1-201ENST00000514241 658 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 SEPT10P1-201ENST00000517342 1162 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 IGLV3-24-201ENST00000517477 197 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 PMS2P3-207ENST00000529061 717 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 RPSAP75-201ENST00000605848 301 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AL159169.2-201ENST00000610061 1269 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC068726.1-201ENST00000610993 341 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 AC000123.3-201ENST00000624029 4975 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KCNIP3Q9Y2W7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC025574.1-201ENST00000554784 1653 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 SELENOWP1-201ENST00000322792 252 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RNA5SP77-201ENST00000365394 120 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL672167.2-201ENST00000377164 879 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 PSMA6P1-201ENST00000400275 741 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC016739.1-201ENST00000405359 345 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 HYALP1-201ENST00000417674 1279 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RIMKLBP2-201ENST00000424737 654 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 MTND6P12-201ENST00000428247 522 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 GAPDHP19-201ENST00000431768 1005 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 BMS1P10-201ENST00000443754 1120 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL589765.3-201ENST00000446084 462 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RPS18P1-201ENST00000447840 458 ntBASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.7□□□□□ -1.66
KCNIP3Q9Y2W7 RNA5SP103-201ENST00000459503 118 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms