Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 LINC02019-201ENST00000608605 2060 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 MIR133A2-201ENST00000347538 102 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 NPM1P37-201ENST00000403105 874 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 TRGV5P-201ENST00000419915 354 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AL133173.1-201ENST00000423458 397 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 Z84478.1-201ENST00000438230 1219 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC092106.1-201ENST00000444291 373 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 TAAR4P-201ENST00000454843 1039 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 UBFD1P1-201ENST00000473259 814 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AP000797.2-201ENST00000475768 606 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC109481.1-201ENST00000509173 282 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC021193.1-201ENST00000511607 420 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 NRBF2P4-201ENST00000520874 850 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 RBM22P12-201ENST00000567098 1255 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AP005403.1-201ENST00000579720 229 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AL356608.1-201ENST00000610034 820 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC008115.3-201ENST00000614874 549 ntBASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS29Q9UBQ0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AC015689.2-201ENST00000528172 1738 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 RNA5SP46-201ENST00000362370 120 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 RNU2-18P-201ENST00000411224 162 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 REREP1Y-201ENST00000422655 198 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 BX119321.1-201ENST00000428912 797 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 REREP2Y-201ENST00000439103 200 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 IGKV2-4-201ENST00000523070 340 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AL049872.1-201ENST00000556323 322 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 AC007683.2-201ENST00000624681 714 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 OR13C1P-202ENST00000641378 2919 ntBASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS29Q9UBQ0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms