Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLCF1Q9UBD9 Z83820.1-201ENST00000456978 1499 ntBASIC5□□□□□ -1.61
CLCF1Q9UBD9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCF1Q9UBD9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5□□□□□ -1.61
CLCF1Q9UBD9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLCF1Q9UBD9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCF1Q9UBD9 BCORP1-203ENST00000513194 5093 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 GAPDHP24-201ENST00000328713 983 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 RN7SKP186-201ENST00000365371 303 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 RNU4-2-201ENST00000365668 141 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 GNG5P2-201ENST00000372054 207 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 RN7SKP59-201ENST00000410520 314 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 GABARAPL3-201ENST00000412799 354 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 RPS26P38-201ENST00000414476 348 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 RNGTTP1-201ENST00000420965 728 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC011225.1-201ENST00000457751 369 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 COPS8P2-201ENST00000473228 627 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC090638.1-201ENST00000498296 909 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 IGKV2-19-201ENST00000518132 283 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC027026.1-201ENST00000532323 742 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC125494.2-201ENST00000602431 657 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 SUGT1P3-202ENST00000604259 383 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AL118522.2-201ENST00000616045 615 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 AC132068.1-201ENST00000623805 459 ntBASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCF1Q9UBD9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 TRAV35-201ENST00000390462 330 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 CFL1P1-202ENST00000432948 411 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 RPL12P39-201ENST00000455456 496 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 RN7SL51P-201ENST00000468230 285 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 AC021146.10-201ENST00000515628 706 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 DHFRP1-201ENST00000579682 559 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 SUMO2P15-201ENST00000604285 278 ntBASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCF1Q9UBD9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms