Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AP000473.2-201ENST00000602659 1537 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AL360270.2-201ENST00000562952 5985 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 MT-RNR2-201ENST00000387347 1559 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 SNORA70.6-201ENST00000383934 134 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AL009179.1-201ENST00000406085 265 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 RMRPP5-201ENST00000411156 267 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC010740.1-201ENST00000417035 684 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 CDY8P-201ENST00000428380 1279 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 DNAJA1P5-201ENST00000440278 943 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 CDY20P-201ENST00000447528 1279 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AP002371.1-201ENST00000463604 433 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC006499.4-201ENST00000510947 694 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC027026.1-201ENST00000532323 742 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 IGBP1P1-201ENST00000554337 1009 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AP001496.3-201ENST00000580230 913 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AL499605.1-201ENST00000604628 403 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AL451049.1-201ENST00000608672 497 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 AC021766.1-201ENST00000624404 741 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 LINC01963-201ENST00000562038 3148 ntBASIC5.67□□□□□ -1.5
LRRC40Q9H9A6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC106872.5-201ENST00000508856 1416 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 ABCC13-202ENST00000463099 3842 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC006206.1-201ENST00000544842 3387 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC015689.2-201ENST00000528172 1738 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC020633.1-201ENST00000468439 2247 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 OR52B3P-201ENST00000314715 928 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 HMGB1P20-201ENST00000402555 677 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 MTND4LP21-201ENST00000415303 295 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC115283.1-201ENST00000427353 400 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 RPL7P56-201ENST00000429441 717 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 FTLP19-201ENST00000433300 394 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 SEPT7P3-201ENST00000455017 621 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 RNU6-615P-201ENST00000516065 106 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 RN7SKP70-201ENST00000516655 271 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC008126.1-201ENST00000549019 480 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AL096712.1-201ENST00000614561 159 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 MRE11P1-201ENST00000464884 2127 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 AC079097.1-201ENST00000512187 1399 ntBASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC40Q9H9A6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms