Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RNU1-134P-201ENST00000362935 165 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 U3.10-201ENST00000364459 214 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RN7SKP166-201ENST00000410812 305 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 GLUD1P9-201ENST00000420997 1173 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RPL12P12-201ENST00000424633 501 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC130360.1-201ENST00000425489 1117 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AKR1B10P1-201ENST00000425765 942 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 MTND2P2-201ENST00000434633 945 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 CUBNP2-201ENST00000443534 1139 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 FCF1P7-201ENST00000451185 558 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RN7SL809P-201ENST00000482040 297 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RN7SL568P-201ENST00000493069 298 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RN7SL362P-201ENST00000494228 267 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 TOMM22P4-201ENST00000511318 336 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 MAST4-IT1-201ENST00000514241 658 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 OR56A7P-201ENST00000524865 941 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC130365.2-201ENST00000525882 1201 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AL049874.4-201ENST00000557593 255 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC009962.1-201ENST00000567327 3813 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 MIR4701-201ENST00000583094 63 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC073333.2-201ENST00000603589 769 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC138473.1-201ENST00000605717 526 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AL645933.2-201ENST00000606743 1207 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC092681.3-201ENST00000609463 678 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC096861.1-201ENST00000616652 240 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 MIR6721-201ENST00000617181 87 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 RMST_5.1-201ENST00000618704 126 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AL512652.1-201ENST00000619006 500 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC138965.3-201ENST00000623875 498 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRDL1Q9BU40 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 RN7SKP69-201ENST00000365390 305 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 BMS1P3-201ENST00000372011 932 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 RNA5SP187-201ENST00000384400 119 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 OOSP1-201ENST00000398992 1270 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 AL359885.1-201ENST00000415786 903 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 MTCYBP7-201ENST00000419540 1134 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 OR6C64P-201ENST00000419708 825 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 AL136231.1-201ENST00000429407 730 ntBASIC4.66□□□□□ -1.66
CHRDL1Q9BU40 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms