Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC090114.3-201ENST00000479267 829 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RPL7P40-201ENST00000481703 745 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RPS6P4-201ENST00000494693 758 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 RN7SL187P-201ENST00000495587 303 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 OR10J9P-201ENST00000511932 987 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC131935.1-201ENST00000524621 333 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 OR9G2P-201ENST00000533326 880 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 UBE2NP1-201ENST00000545592 458 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC009729.1-201ENST00000548873 1133 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 HNRNPCP1-201ENST00000556181 766 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC090888.3-201ENST00000558917 509 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC116553.2-201ENST00000564203 463 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL035410.2-201ENST00000604963 864 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC012557.1-201ENST00000607115 611 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AL137000.1-201ENST00000610528 1244 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC009878.1-201ENST00000621819 340 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC091932.2-201ENST00000623014 291 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 AC063952.1-203ENST00000634410 658 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 TTC39DP-201ENST00000416781 1688 ntBASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.42□□□□□ -1.38
PTCHD1Q96NR3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 ZNF833P-201ENST00000424938 1494 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC095050.2-201ENST00000510748 1458 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 ICE2P1-201ENST00000512800 1849 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 PSG10P-201ENST00000501199 1500 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 MT-TH-201ENST00000387441 69 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 SNORA26.8-201ENST00000391306 124 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 NPM1P38-201ENST00000403835 865 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AL663109.1-201ENST00000411498 844 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC027644.1-201ENST00000419595 298 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 RPL21P43-201ENST00000425440 472 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 FO393419.3-201ENST00000428741 282 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC092170.1-201ENST00000440211 356 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 GTF3AP5-201ENST00000442645 697 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 CDC42P1-201ENST00000456658 548 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 RN7SL790P-201ENST00000474043 298 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC104090.1-201ENST00000506341 1171 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC021220.1-201ENST00000507445 630 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC093878.1-201ENST00000515630 432 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 HIGD1AP10-201ENST00000527837 282 ntBASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PTCHD1Q96NR3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms