Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC007342.5-201ENST00000571340 2142 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 RNA5SP279-201ENST00000365513 117 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 RN7SKP281-201ENST00000410472 352 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AL034379.1-201ENST00000423216 253 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 MTND4LP13-201ENST00000425022 298 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 GAPDHP59-201ENST00000435908 267 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AL645931.1-201ENST00000439737 410 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC092106.1-201ENST00000444291 373 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 MOB1AP2-201ENST00000446060 614 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 RN7SL326P-201ENST00000477493 296 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC118282.1-201ENST00000506408 765 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 C1DP5-201ENST00000525775 383 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 NOP56P3-201ENST00000549457 385 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC090616.1-201ENST00000583895 447 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC027334.1-201ENST00000603257 310 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC012213.4-201ENST00000606457 354 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC092681.3-201ENST00000609463 678 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 MIR6071-201ENST00000616741 78 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AL645927.2-201ENST00000618350 349 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 MIR6861-201ENST00000618657 64 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC109809.1-201ENST00000619665 545 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 FAM27E2-201ENST00000619668 403 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC068880.4-201ENST00000623082 495 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 TMEM30CP-203ENST00000637814 1035 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC073869.7-201ENST00000640874 297 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 AC022325.1-201ENST00000502748 2199 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 HSPD1P9-201ENST00000420325 1636 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 RNA5SP453-201ENST00000362503 119 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 RNU6-1000P-201ENST00000391066 106 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 OR13Z1P-201ENST00000416141 834 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 Z80107.1-201ENST00000436830 412 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 SOCS5P1-201ENST00000440415 949 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 RPS10P18-201ENST00000442662 495 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC010240.2-201ENST00000445363 1205 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC006326.1-201ENST00000445465 787 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 RPL7L1P3-201ENST00000455249 689 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 RN7SL369P-201ENST00000477138 299 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 MTCO3P27-201ENST00000514397 196 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 RNU6-319P-201ENST00000516025 108 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC104115.2-201ENST00000523026 687 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 SOX5P1-201ENST00000524155 1127 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC093014.1-201ENST00000548926 724 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 TPRX1P1-201ENST00000557620 319 ntBASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS50Q96JG6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms