Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC245884.10-201ENST00000597355 337 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC125494.2-201ENST00000602431 657 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC068620.3-201ENST00000602749 560 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC096708.4-201ENST00000620563 552 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 AC025262.3-201ENST00000623666 360 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HPS3Q969F9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC011933.2-201ENST00000578539 2790 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 AC005224.3-201ENST00000584683 2140 ntBASIC6.61□□□□□ -1.35
HPS3Q969F9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
HPS3Q969F9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.6□□□□□ -1.35
HPS3Q969F9 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.6□□□□□ -1.35
HPS3Q969F9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.6□□□□□ -1.35
HPS3Q969F9 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 AL442128.2-201ENST00000620246 1824 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 RNFT1P3-201ENST00000340898 1052 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 TATDN1P1-201ENST00000414123 891 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 NENFP1-201ENST00000419476 466 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC245884.2-201ENST00000426257 404 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.6□□□□□ -1.35
HPS3Q969F9 RPSAP40-201ENST00000442343 891 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 RPS7P3-201ENST00000443360 580 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 AL445466.1-201ENST00000448432 357 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC008410.1-201ENST00000483777 339 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 SUMO1P1-201ENST00000497904 306 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC008629.2-201ENST00000503783 483 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 NAMPTP2-201ENST00000505629 1115 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 GOLGA5P1-201ENST00000507317 980 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 AC022826.1-201ENST00000519383 805 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.6□□□□□ -1.35
HPS3Q969F9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.6□□□□□ -1.35
HPS3Q969F9 TOMM20P1-201ENST00000534518 427 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC025918.2-201ENST00000558683 763 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC092332.1-201ENST00000563684 829 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.6□□□□□ -1.35
HPS3Q969F9 SNX18P12-201ENST00000624821 759 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AL356118.1-201ENST00000635272 1078 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC130304.1-201ENST00000622942 2385 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.6□□□□□ -1.35
HPS3Q969F9 AC104966.1-201ENST00000467010 1464 ntBASIC6.6□□□□□ -1.35
HPS3Q969F9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HPS3Q969F9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 TAF9BP2-201ENST00000400856 499 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AL606495.1-201ENST00000422100 813 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AL512661.1-201ENST00000434586 1253 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC097463.1-201ENST00000447288 481 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 MTATP6P14-201ENST00000455189 673 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC021146.7-201ENST00000509604 775 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.59□□□□□ -1.35
HPS3Q969F9 SOX5P1-201ENST00000524155 1127 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms