Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AL355488.2-201ENST00000609909 2850 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 RNA5SP46-201ENST00000362370 120 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 U3.10-201ENST00000364459 214 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AL096711.1-201ENST00000404780 554 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 DHFRP5-201ENST00000406944 564 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC002504.1-201ENST00000438281 691 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC104164.1-201ENST00000460282 590 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 TRBV5-2-201ENST00000489095 273 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 RNU4ATAC-201ENST00000580972 127 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 GMCL1P2-201ENST00000605230 823 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 RPL12P48-201ENST00000605620 304 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 AP005431.1-201ENST00000618479 319 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC106730.3-201ENST00000624568 641 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 AC012078.1-201ENST00000405035 1646 ntBASIC5.48□□□□□ -1.53
TM9SF4Q92544 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 SNORA40.4-201ENST00000390971 128 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AL445928.1-201ENST00000435545 222 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AL162739.1-201ENST00000450606 307 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC108751.3-201ENST00000461814 1020 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC022215.1-201ENST00000481770 362 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC006530.1-201ENST00000555980 571 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 MIR4433B-201ENST00000581329 102 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 MIR4505-201ENST00000582238 73 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC005229.3-201ENST00000603438 323 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 FO393422.1-201ENST00000603908 708 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 LSM1P2-201ENST00000604911 322 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AP005131.7-201ENST00000610087 611 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TM9SF4Q92544 MTCO1P1-201ENST00000624263 1081 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 HPVC1-201ENST00000629899 1198 ntBASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TM9SF4Q92544 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms