Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC009779.8-201ENST00000641684 4384 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC010132.2-201ENST00000295493 1043 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 RNU6-650P-201ENST00000365658 111 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AL034379.1-201ENST00000423216 253 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 RPS7P3-201ENST00000443360 580 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 OR13K1P-201ENST00000444577 975 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC073909.1-201ENST00000447112 999 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AL627224.1-201ENST00000448334 444 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 LDHBP2-201ENST00000456969 1005 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC093166.4-201ENST00000457867 318 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 GOLGA5P1-201ENST00000507317 980 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 NOP56P3-201ENST00000549457 385 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC027216.1-201ENST00000577726 685 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 MIR1273E-201ENST00000581165 102 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 OR7E18P-201ENST00000592589 702 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 RNU6-84P-201ENST00000607737 102 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC005021.1-201ENST00000608730 355 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AL391834.1-201ENST00000609609 560 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC245389.2-201ENST00000616023 576 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC242843.1-201ENST00000618702 573 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 AC022919.1-201ENST00000624979 626 ntBASIC5.98□□□□□ -1.45
HMGB4Q8WW32 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
HMGB4Q8WW32 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 RNA5SP132-201ENST00000364725 118 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 OR13C3-201ENST00000374781 1108 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 MRPL53P1-201ENST00000414323 319 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL355433.1-201ENST00000422804 300 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL354692.1-201ENST00000423044 315 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL662874.1-201ENST00000426065 230 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 DSTNP5-201ENST00000427921 523 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL445928.1-201ENST00000435545 222 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 RPL23AP60-201ENST00000450011 454 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LRRC37A14P-201ENST00000452297 462 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 RPS27AP3-201ENST00000453803 454 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC099521.1-201ENST00000482557 334 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 MTCO2P9-201ENST00000503214 694 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 DUTP7-201ENST00000507982 486 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC074087.1-201ENST00000512059 724 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 IGKV2-18-201ENST00000522607 343 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC126365.2-201ENST00000580630 379 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 PRELID3BP3-201ENST00000584963 545 ntBASIC5.97□□□□□ -1.45
HMGB4Q8WW32 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGB4Q8WW32 MTCO3P22-201ENST00000603219 784 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms