Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 CYCSP42-201ENST00000450823 238 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 RPL10P17-201ENST00000453852 316 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 RN7SKP92-201ENST00000517266 244 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC139713.2-214ENST00000642059 1811 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 GAPDHP15-201ENST00000398586 975 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 CDC27P1-201ENST00000445384 715 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AURKAPS2-201ENST00000454983 333 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 FTH1P8-201ENST00000498161 514 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC009597.2-201ENST00000604659 592 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AL356752.1-201ENST00000615844 593 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC006338.2-201ENST00000616864 791 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 UGT2B25P-201ENST00000511504 1586 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AP002364.1-201ENST00000623330 3386 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 ASNSP1-204ENST00000641977 1664 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 SNORA70.4-201ENST00000365509 134 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 MIR134-201ENST00000385258 73 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 RPS3AP23-201ENST00000401762 784 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AL451062.2-201ENST00000427515 271 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 RPS3AP38-201ENST00000435889 763 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 TXNP2-201ENST00000443918 295 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AL603882.1-201ENST00000463059 681 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 IGKV2D-10-201ENST00000520194 281 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC073916.1-201ENST00000545095 130 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC010327.2-201ENST00000587647 488 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 AC013488.1-201ENST00000526618 1838 ntBASIC5.37□□□□□ -1.55
RIF1Q5UIP0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RIF1Q5UIP0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 RN7SKP263-201ENST00000411194 309 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AL590399.4-201ENST00000436561 601 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 RN7SKP288-201ENST00000516227 268 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 RNA5SP143-201ENST00000516936 115 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 BNIP3P11-201ENST00000603878 563 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AL121768.1-201ENST00000613917 2544 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 SNORA17.1-201ENST00000362945 126 ntBASIC5.36□□□□□ -1.55
RIF1Q5UIP0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.36□□□□□ -1.55
RIF1Q5UIP0 AC119751.6-201ENST00000416712 186 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms