Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC022001.1-201ENST00000605193 268 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AL122023.1-201ENST00000622847 530 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 TRIM51GP-201ENST00000534741 1350 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 RNA5SP77-201ENST00000365394 120 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.22□□□□□ -1.57
SCN1BQ07699 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 MYL6P5-201ENST00000412707 459 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 DHFRP2-201ENST00000414224 547 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 MTND2P12-201ENST00000417560 1252 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN1BQ07699 HSPE1P16-201ENST00000426640 348 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC128677.1-201ENST00000436016 442 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AC010086.1-201ENST00000437359 1052 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 PPIAP10-201ENST00000438675 458 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AL591363.1-201ENST00000450091 483 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AL133351.3-201ENST00000454998 193 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN1BQ07699 ACA64.4-201ENST00000459070 127 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN1BQ07699 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN1BQ07699 SULT1C2P2-201ENST00000562517 294 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.22□□□□□ -1.57
SCN1BQ07699 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC025283.1-201ENST00000572039 734 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC063977.7-201ENST00000594454 337 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AC018809.2-201ENST00000602436 3823 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AC012368.3-201ENST00000604190 219 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SCN1BQ07699 MIR6885-201ENST00000612241 66 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AL118556.2-201ENST00000614375 824 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 MIR6774-201ENST00000614651 70 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AL162574.1-201ENST00000615702 950 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 MIR6811-201ENST00000620409 58 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC007603.3-201ENST00000636915 979 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 AC027228.2-201ENST00000567141 2154 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
SCN1BQ07699 ABCC13-202ENST00000463099 3842 ntBASIC5.22□□□□□ -1.57
SCN1BQ07699 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN1BQ07699 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCN1BQ07699 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SCN1BQ07699 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.21□□□□□ -1.57
SCN1BQ07699 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.21□□□□□ -1.57
SCN1BQ07699 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 HSPA8P14-201ENST00000552265 1805 ntBASIC5.21□□□□□ -1.58
SCN1BQ07699 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.21□□□□□ -1.58
SCN1BQ07699 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.21□□□□□ -1.58
SCN1BQ07699 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCN1BQ07699 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms