Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 MIR375-201ENST00000362103 64 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 RNA5SP131-201ENST00000365452 119 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 SNORD56.6-201ENST00000384569 71 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 PPIAP9-201ENST00000403866 498 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 GPS2P1-201ENST00000411761 986 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL445665.1-202ENST00000452436 324 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 TAAR4P-201ENST00000454843 1039 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 RPL12P24-201ENST00000474907 486 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 CR383656.1-201ENST00000484916 377 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC091912.1-201ENST00000511351 248 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC079600.1-201ENST00000550326 297 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AP001962.1-201ENST00000624114 559 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC003973.3-201ENST00000624863 2822 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HMGCS1Q01581 AC106872.5-201ENST00000508856 1416 ntBASIC5.31□□□□□ -1.56
HMGCS1Q01581 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HMGCS1Q01581 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 RNA5SP510-201ENST00000364697 99 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 EEF1B2P8-201ENST00000414101 671 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 RPS29P14-201ENST00000431518 171 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 RPL12P11-201ENST00000439970 501 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 AC073109.1-201ENST00000445066 978 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 PSMA2P2-201ENST00000504319 686 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 SNORD46.2-201ENST00000516021 102 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 RNU6-615P-201ENST00000516065 106 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AP005403.1-201ENST00000579720 229 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 MIR4310-201ENST00000582950 57 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.3□□□□□ -1.56
HMGCS1Q01581 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGCS1Q01581 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS1Q01581 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGCS1Q01581 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS1Q01581 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms