Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 UGT2B26P-201ENST00000508672 1613 ntBASIC3.99□□□□□ -1.77
CKS1BP61024 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC3.99□□□□□ -1.77
CKS1BP61024 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CKS1BP61024 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CKS1BP61024 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CKS1BP61024 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 DHFRP2-201ENST00000414224 547 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AC099677.3-201ENST00000427081 395 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 PSMD10P2-201ENST00000432890 672 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC3.98□□□□□ -1.77
CKS1BP61024 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 AL354872.1-201ENST00000456361 967 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 HSPE1P22-201ENST00000456856 327 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AC093166.4-201ENST00000457867 318 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 PDCL3P4-201ENST00000489621 720 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.98□□□□□ -1.77
CKS1BP61024 AP006245.2-201ENST00000522004 300 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC090424.1-201ENST00000535243 736 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC244502.2-201ENST00000543361 851 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC3.98□□□□□ -1.77
CKS1BP61024 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC091304.5-201ENST00000568969 158 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 RN7SL435P-201ENST00000584418 282 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AC119403.2-201ENST00000590960 598 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC015712.7-201ENST00000615211 635 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC027506.1-201ENST00000621395 198 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 AC015871.5-202ENST00000623252 701 ntBASIC3.98□□□□□ -1.77
CKS1BP61024 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 UGP2-232ENST00000640075 567 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.98□□□□□ -1.77
CKS1BP61024 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.98□□□□□ -1.77
CKS1BP61024 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC3.98□□□□□ -1.77
CKS1BP61024 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CKS1BP61024 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CKS1BP61024 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CKS1BP61024 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.97□□□□□ -1.77
CKS1BP61024 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CKS1BP61024 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC3.97□□□□□ -1.77
CKS1BP61024 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.97□□□□□ -1.77
CKS1BP61024 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CKS1BP61024 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CKS1BP61024 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC3.97□□□□□ -1.77
CKS1BP61024 DLD-205ENST00000440410 1993 ntTSL 2 BASIC3.97□□□□□ -1.77
CKS1BP61024 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CKS1BP61024 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CKS1BP61024 RPL11P4-201ENST00000332269 436 ntBASIC3.97□□□□□ -1.77
CKS1BP61024 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CKS1BP61024 RNU1-94P-201ENST00000362627 173 ntBASIC3.97□□□□□ -1.77
CKS1BP61024 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CKS1BP61024 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CKS1BP61024 AC087752.1-201ENST00000391360 558 ntBASIC3.97□□□□□ -1.77
CKS1BP61024 HMGB3P7-201ENST00000400214 611 ntBASIC3.97□□□□□ -1.77
CKS1BP61024 SNRPEP6-201ENST00000407465 277 ntBASIC3.97□□□□□ -1.77
CKS1BP61024 AC245096.1-201ENST00000413104 546 ntBASIC3.97□□□□□ -1.77
CKS1BP61024 ATG4AP1-201ENST00000416893 538 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms