Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNORA11.3-201ENST00000408471 128 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 RN7SKP166-201ENST00000410812 305 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 BX284632.2-201ENST00000421091 399 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC073464.3-201ENST00000422564 712 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 CDY8P-201ENST00000428380 1279 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 NPM1P18-201ENST00000434232 732 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 VN1R110P-201ENST00000438988 971 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AL512605.1-202ENST00000441919 381 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 RPS7P3-201ENST00000443360 580 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 BMS1P10-201ENST00000443754 1120 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AL359955.2-201ENST00000445380 353 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 CDY20P-201ENST00000447528 1279 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 RAB28P3-201ENST00000448325 597 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC144530.1-201ENST00000452862 555 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 SDC4P-201ENST00000453285 601 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 GEMIN2P1-201ENST00000454246 752 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 MTND2P30-201ENST00000456663 382 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 ACA64.4-201ENST00000459070 127 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 ACA64.1-201ENST00000459171 127 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC104164.1-201ENST00000460282 590 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC105918.1-201ENST00000474399 838 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN20P56880 RPL12P24-201ENST00000474907 486 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC138409.2-202ENST00000507274 458 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 SETP21-201ENST00000514799 892 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 snoU109.5-201ENST00000516231 132 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 WBP1LP3-201ENST00000523033 208 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AP004609.2-201ENST00000532177 190 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN20P56880 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN20P56880 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC060780.2-201ENST00000589047 198 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN20P56880 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 AL022394.1-201ENST00000606979 292 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 SNORA11.6-201ENST00000619030 128 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC097372.4-201ENST00000625025 466 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 AC129915.3-201ENST00000634128 948 ntBASIC5.37□□□□□ -1.55
CLDN20P56880 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLDN20P56880 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN20P56880 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN20P56880 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CLDN20P56880 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN20P56880 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLDN20P56880 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLDN20P56880 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN20P56880 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN20P56880 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN20P56880 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN20P56880 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN20P56880 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLDN20P56880 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 ST13P16-201ENST00000401760 781 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 HMGN1P20-201ENST00000411849 300 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 IPPKP1-201ENST00000422501 768 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 BX323845.3-201ENST00000428215 527 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 AC079807.1-201ENST00000429993 481 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 PCBP2P1-201ENST00000437262 977 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 TOMM22P4-201ENST00000511318 336 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN20P56880 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN20P56880 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.36□□□□□ -1.55
CLDN20P56880 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.36□□□□□ -1.55
CLDN20P56880 AC122134.1-202ENST00000569111 1201 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 MIMT1-201ENST00000597105 1050 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AL136131.3-201ENST00000607600 188 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AC084824.5-201ENST00000612009 413 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AP003499.2-201ENST00000624100 483 ntBASIC5.36□□□□□ -1.55
CLDN20P56880 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN20P56880 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN20P56880 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLDN20P56880 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDN20P56880 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms