Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 AC006206.1-201ENST00000544842 3387 ntBASIC5.76□□□□□ -1.49
CDH6P55285 LINC01963-201ENST00000562038 3148 ntBASIC5.76□□□□□ -1.49
CDH6P55285 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH6P55285 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDH6P55285 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH6P55285 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH6P55285 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH6P55285 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.75□□□□□ -1.49
CDH6P55285 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
CDH6P55285 YES1P1-201ENST00000418510 1628 ntBASIC5.75□□□□□ -1.49
CDH6P55285 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDH6P55285 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH6P55285 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CDH6P55285 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH6P55285 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH6P55285 NPM1P37-201ENST00000403105 874 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH6P55285 NDUFB4P8-201ENST00000435351 367 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH6P55285 PCNPP2-201ENST00000441651 455 ntBASIC5.75□□□□□ -1.49
CDH6P55285 VDAC2P4-201ENST00000452925 711 ntBASIC5.75□□□□□ -1.49
CDH6P55285 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH6P55285 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CDH6P55285 GOLGA5P1-201ENST00000507317 980 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH6P55285 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH6P55285 AC097486.1-201ENST00000515331 210 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH6P55285 AC022826.1-201ENST00000519383 805 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.75□□□□□ -1.49
CDH6P55285 AC090888.3-201ENST00000558917 509 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH6P55285 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH6P55285 MRPS21P7-201ENST00000566937 238 ntBASIC5.75□□□□□ -1.49
CDH6P55285 AC021766.1-201ENST00000624404 741 ntBASIC5.75□□□□□ -1.49
CDH6P55285 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDH6P55285 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH6P55285 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH6P55285 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH6P55285 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH6P55285 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 AL359715.3-201ENST00000569267 2123 ntBASIC5.74□□□□□ -1.49
CDH6P55285 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 RNA5SP46-201ENST00000362370 120 ntBASIC5.74□□□□□ -1.49
CDH6P55285 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH6P55285 RANP7-201ENST00000418085 644 ntBASIC5.74□□□□□ -1.49
CDH6P55285 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 AKR1B10P1-201ENST00000425765 942 ntBASIC5.74□□□□□ -1.49
CDH6P55285 MTND6P12-201ENST00000428247 522 ntBASIC5.74□□□□□ -1.49
CDH6P55285 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 AC073109.1-201ENST00000445066 978 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AL450996.1-201ENST00000445574 1202 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH6P55285 EEF1B2P6-201ENST00000445713 673 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AL161722.1-201ENST00000446972 1032 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC009963.4-201ENST00000448535 339 ntBASIC5.74□□□□□ -1.49
CDH6P55285 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDH6P55285 AL358876.1-201ENST00000453364 1075 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC083899.1-201ENST00000454465 3819 ntBASIC5.74□□□□□ -1.49
CDH6P55285 SUMO2P4-201ENST00000504193 276 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC090568.1-201ENST00000509499 856 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH6P55285 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 AC015982.1-201ENST00000608113 465 ntBASIC5.74□□□□□ -1.49
CDH6P55285 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH6P55285 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH6P55285 AC132825.8-201ENST00000640783 297 ntBASIC5.74□□□□□ -1.49
CDH6P55285 AC008691.1-209ENST00000642094 814 ntBASIC5.74□□□□□ -1.49
CDH6P55285 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH6P55285 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH6P55285 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH6P55285 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms