Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC008115.4-201ENST00000619780 775 ntBASIC6.18□□□□□ -1.42
VCPP55072 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
VCPP55072 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
VCPP55072 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
VCPP55072 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 AC023421.1-201ENST00000590535 1785 ntBASIC6.17□□□□□ -1.42
VCPP55072 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
VCPP55072 SELENOWP1-201ENST00000322792 252 ntBASIC6.17□□□□□ -1.42
VCPP55072 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VCPP55072 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VCPP55072 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VCPP55072 OR6E1P-201ENST00000414424 923 ntBASIC6.17□□□□□ -1.42
VCPP55072 RANP7-201ENST00000418085 644 ntBASIC6.17□□□□□ -1.42
VCPP55072 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.17□□□□□ -1.42
VCPP55072 AC126120.1-201ENST00000431082 470 ntBASIC6.17□□□□□ -1.42
VCPP55072 GSTA7P-201ENST00000438425 448 ntBASIC6.17□□□□□ -1.42
VCPP55072 CNOT7P2-201ENST00000441051 832 ntBASIC6.17□□□□□ -1.42
VCPP55072 RN7SL72P-201ENST00000460697 269 ntBASIC6.17□□□□□ -1.42
VCPP55072 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.17□□□□□ -1.42
VCPP55072 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.17□□□□□ -1.42
VCPP55072 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 OR7E158P-201ENST00000524483 910 ntBASIC6.17□□□□□ -1.42
VCPP55072 AC110056.1-201ENST00000525759 911 ntBASIC6.17□□□□□ -1.42
VCPP55072 OR8G3P-201ENST00000533406 921 ntBASIC6.17□□□□□ -1.42
VCPP55072 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.17□□□□□ -1.42
VCPP55072 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.17□□□□□ -1.42
VCPP55072 HMGN2P6-201ENST00000551091 273 ntBASIC6.17□□□□□ -1.42
VCPP55072 AC004825.1-201ENST00000555068 586 ntBASIC6.17□□□□□ -1.42
VCPP55072 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.17□□□□□ -1.42
VCPP55072 AC007346.2-201ENST00000564816 892 ntBASIC6.17□□□□□ -1.42
VCPP55072 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 AL359513.1-201ENST00000614364 557 ntBASIC6.17□□□□□ -1.42
VCPP55072 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 CU639417.4-201ENST00000623928 207 ntBASIC6.17□□□□□ -1.42
VCPP55072 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 AC000095.2-202ENST00000637415 154 ntBASIC6.17□□□□□ -1.42
VCPP55072 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 PARP4P2-201ENST00000446672 3326 ntBASIC6.17□□□□□ -1.42
VCPP55072 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
VCPP55072 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.17□□□□□ -1.42
VCPP55072 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 AC116158.1-201ENST00000560231 2129 ntBASIC6.17□□□□□ -1.42
VCPP55072 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.17□□□□□ -1.42
VCPP55072 AL591135.1-201ENST00000401578 5914 ntBASIC6.17□□□□□ -1.42
VCPP55072 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
VCPP55072 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VCPP55072 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VCPP55072 AL121839.2-201ENST00000565058 6943 ntBASIC6.16□□□□□ -1.42
VCPP55072 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VCPP55072 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VCPP55072 AL050305.1-201ENST00000399993 1230 ntBASIC6.16□□□□□ -1.42
VCPP55072 RN7SKP17-201ENST00000411242 351 ntBASIC6.16□□□□□ -1.42
VCPP55072 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.16□□□□□ -1.42
VCPP55072 AL807761.1-201ENST00000417622 171 ntBASIC6.16□□□□□ -1.42
VCPP55072 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.16□□□□□ -1.42
VCPP55072 REREP1Y-201ENST00000422655 198 ntBASIC6.16□□□□□ -1.42
VCPP55072 KIF4CP-201ENST00000422742 1279 ntBASIC6.16□□□□□ -1.42
VCPP55072 Z84478.1-201ENST00000438230 1219 ntBASIC6.16□□□□□ -1.42
VCPP55072 REREP2Y-201ENST00000439103 200 ntBASIC6.16□□□□□ -1.42
VCPP55072 Z80107.2-201ENST00000445127 392 ntBASIC6.16□□□□□ -1.42
VCPP55072 LRRC37A14P-201ENST00000452297 462 ntBASIC6.16□□□□□ -1.42
VCPP55072 AC104164.1-201ENST00000460282 590 ntBASIC6.16□□□□□ -1.42
VCPP55072 AL603882.1-201ENST00000463059 681 ntBASIC6.16□□□□□ -1.42
VCPP55072 AL672167.3-201ENST00000465951 960 ntBASIC6.16□□□□□ -1.42
VCPP55072 AC023245.1-201ENST00000468501 517 ntBASIC6.16□□□□□ -1.42
VCPP55072 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.16□□□□□ -1.42
VCPP55072 NENFP3-201ENST00000503735 313 ntBASIC6.16□□□□□ -1.42
VCPP55072 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.16□□□□□ -1.42
VCPP55072 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 SNORA43.3-201ENST00000517240 103 ntBASIC6.16□□□□□ -1.42
VCPP55072 IGLV3-30-201ENST00000524362 298 ntBASIC6.16□□□□□ -1.42
VCPP55072 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.16□□□□□ -1.42
VCPP55072 RN7SL708P-201ENST00000580952 299 ntBASIC6.16□□□□□ -1.42
VCPP55072 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.16□□□□□ -1.42
VCPP55072 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms