Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.93□□□□□ -1.46
LHX1P48742 OR4F13P-202ENST00000560066 2054 ntBASIC5.93□□□□□ -1.46
LHX1P48742 AC006600.2-201ENST00000624834 2506 ntBASIC5.93□□□□□ -1.46
LHX1P48742 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.93□□□□□ -1.46
LHX1P48742 KYNUP3-201ENST00000574386 1341 ntBASIC5.93□□□□□ -1.46
LHX1P48742 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.93□□□□□ -1.46
LHX1P48742 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 MTCO1P22-201ENST00000604619 1360 ntBASIC5.93□□□□□ -1.46
LHX1P48742 CASC19-255ENST00000641733 1385 ntBASIC5.93□□□□□ -1.46
LHX1P48742 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LHX1P48742 NCOA4P2-201ENST00000340589 1813 ntBASIC5.92□□□□□ -1.46
LHX1P48742 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.92□□□□□ -1.46
LHX1P48742 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.92□□□□□ -1.46
LHX1P48742 AC093297.3-201ENST00000607056 2517 ntBASIC5.92□□□□□ -1.46
LHX1P48742 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 HSPD1P7-201ENST00000447985 1686 ntBASIC5.92□□□□□ -1.46
LHX1P48742 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.92□□□□□ -1.46
LHX1P48742 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 BCORP1-203ENST00000513194 5093 ntBASIC5.92□□□□□ -1.46
LHX1P48742 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
LHX1P48742 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
LHX1P48742 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LHX1P48742 RNA5SP326-201ENST00000363209 110 ntBASIC5.92□□□□□ -1.46
LHX1P48742 AL391361.1-201ENST00000405580 489 ntBASIC5.92□□□□□ -1.46
LHX1P48742 AC007161.1-204ENST00000423039 460 ntBASIC5.92□□□□□ -1.46
LHX1P48742 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.92□□□□□ -1.46
LHX1P48742 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.92□□□□□ -1.46
LHX1P48742 RANP1-206ENST00000455094 651 ntBASIC5.92□□□□□ -1.46
LHX1P48742 AC007386.1-201ENST00000455212 582 ntBASIC5.92□□□□□ -1.46
LHX1P48742 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.92□□□□□ -1.46
LHX1P48742 ST13P12-201ENST00000508958 1094 ntBASIC5.92□□□□□ -1.46
LHX1P48742 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.92□□□□□ -1.46
LHX1P48742 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.92□□□□□ -1.46
LHX1P48742 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.92□□□□□ -1.46
LHX1P48742 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.92□□□□□ -1.46
LHX1P48742 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.92□□□□□ -1.46
LHX1P48742 AC007204.2-201ENST00000615022 616 ntBASIC5.92□□□□□ -1.46
LHX1P48742 AL118522.2-201ENST00000616045 615 ntBASIC5.92□□□□□ -1.46
LHX1P48742 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.92□□□□□ -1.46
LHX1P48742 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LHX1P48742 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
LHX1P48742 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.92□□□□□ -1.46
LHX1P48742 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.92□□□□□ -1.46
LHX1P48742 UGT2B24P-201ENST00000514441 1597 ntBASIC5.92□□□□□ -1.46
LHX1P48742 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.92□□□□□ -1.46
LHX1P48742 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
LHX1P48742 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LHX1P48742 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 AC011933.2-201ENST00000578539 2790 ntBASIC5.91□□□□□ -1.46
LHX1P48742 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LHX1P48742 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 AL590399.2-201ENST00000427536 309 ntBASIC5.91□□□□□ -1.46
LHX1P48742 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.91□□□□□ -1.46
LHX1P48742 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 AL133445.1-201ENST00000467051 452 ntBASIC5.91□□□□□ -1.46
LHX1P48742 RN7SL547P-201ENST00000490793 290 ntBASIC5.91□□□□□ -1.46
LHX1P48742 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 GAPDHP62-201ENST00000515313 990 ntBASIC5.91□□□□□ -1.46
LHX1P48742 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 RN7SKP99-201ENST00000517028 307 ntBASIC5.91□□□□□ -1.46
LHX1P48742 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.91□□□□□ -1.46
LHX1P48742 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.91□□□□□ -1.46
LHX1P48742 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LHX1P48742 HNRNPRP2-201ENST00000528421 743 ntBASIC5.91□□□□□ -1.46
LHX1P48742 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LHX1P48742 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.91□□□□□ -1.46
LHX1P48742 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 AP000919.1-201ENST00000582850 985 ntBASIC5.91□□□□□ -1.46
LHX1P48742 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 AP000864.1-201ENST00000609424 650 ntBASIC5.91□□□□□ -1.46
LHX1P48742 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 AC021422.1-201ENST00000621212 473 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms