Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.29□□□□□ -1.56
APOBEC1P41238 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.29□□□□□ -1.56
APOBEC1P41238 AC006530.1-201ENST00000555980 571 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 AC090826.1-203ENST00000569235 490 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 AC005726.4-201ENST00000582858 458 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 DNAJC19P3-201ENST00000594491 331 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 AC079315.1-201ENST00000602952 623 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 AL031601.1-201ENST00000605702 394 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 NANOGP3-201ENST00000605855 286 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.29□□□□□ -1.56
APOBEC1P41238 AL356608.1-201ENST00000610034 820 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 RMST_5.1-201ENST00000618704 126 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 AC015722.2-201ENST00000622210 551 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 AP006248.3-201ENST00000623580 594 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.29□□□□□ -1.56
APOBEC1P41238 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.29□□□□□ -1.56
APOBEC1P41238 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 AL158152.1-201ENST00000602652 1435 ntBASIC5.29□□□□□ -1.56
APOBEC1P41238 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.29□□□□□ -1.56
APOBEC1P41238 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.29□□□□□ -1.56
APOBEC1P41238 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
APOBEC1P41238 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOBEC1P41238 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 AC017002.4-201ENST00000604721 1525 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 FBXL21-201ENST00000297158 1305 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 AP000432.2-201ENST00000624164 2048 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOBEC1P41238 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOBEC1P41238 RNA5SP273-201ENST00000362484 113 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 RNA5SP477-201ENST00000362639 119 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.28□□□□□ -1.56
APOBEC1P41238 AL035660.1-201ENST00000422041 222 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 AC126120.1-201ENST00000431082 470 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 AC007563.3-201ENST00000433233 371 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.28□□□□□ -1.56
APOBEC1P41238 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.28□□□□□ -1.56
APOBEC1P41238 AC006326.1-201ENST00000445465 787 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.28□□□□□ -1.56
APOBEC1P41238 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 AC015908.1-201ENST00000478739 476 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.28□□□□□ -1.56
APOBEC1P41238 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 Y_RNA.667-201ENST00000516212 107 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 RNA5SP438-201ENST00000516561 112 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.28□□□□□ -1.56
APOBEC1P41238 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 AL513327.3-201ENST00000602618 469 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 FAM27E4-201ENST00000605259 342 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 AL096803.3-201ENST00000609032 532 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 AC005899.7-201ENST00000618199 588 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 OR8A1-204ENST00000642111 1145 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOBEC1P41238 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.28□□□□□ -1.56
APOBEC1P41238 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
APOBEC1P41238 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOBEC1P41238 AC003985.2-201ENST00000562268 1669 ntBASIC5.28□□□□□ -1.56
APOBEC1P41238 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOBEC1P41238 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.27□□□□□ -1.57
APOBEC1P41238 AC087516.1-201ENST00000561236 2428 ntBASIC5.27□□□□□ -1.57
APOBEC1P41238 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
APOBEC1P41238 AL355834.1-201ENST00000556602 3965 ntBASIC5.27□□□□□ -1.57
APOBEC1P41238 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.27□□□□□ -1.57
APOBEC1P41238 AP002512.4-202ENST00000641599 4530 ntBASIC5.27□□□□□ -1.57
APOBEC1P41238 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.27□□□□□ -1.57
APOBEC1P41238 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOBEC1P41238 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
APOBEC1P41238 AC010132.2-201ENST00000295493 1043 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms