Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.66□□□□□ -1.5
HNF4AP41235 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC023141.8-201ENST00000442554 208 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HNF4AP41235 CCRL1P1-201ENST00000449542 1053 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 RPL31P20-201ENST00000449593 360 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC090602.1-201ENST00000469695 252 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC006539.1-201ENST00000481419 501 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC099521.1-201ENST00000482557 334 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 ST13P12-201ENST00000508958 1094 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC011411.1-201ENST00000509592 876 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 SCARNA18.1-201ENST00000516330 83 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 MTND2P7-201ENST00000521337 640 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC005363.1-201ENST00000530779 351 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC007956.1-201ENST00000555623 542 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 MIR4776-2-201ENST00000580204 80 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC060780.2-201ENST00000589047 198 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 AC090953.1-201ENST00000604305 1092 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 MIR6809-201ENST00000612189 116 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AL122125.1-201ENST00000616999 600 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.66□□□□□ -1.5
HNF4AP41235 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HNF4AP41235 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 OR8A1-204ENST00000642111 1145 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
HNF4AP41235 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HNF4AP41235 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.66□□□□□ -1.5
HNF4AP41235 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HNF4AP41235 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.66□□□□□ -1.5
HNF4AP41235 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HNF4AP41235 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HNF4AP41235 AC093849.1-201ENST00000563631 2209 ntBASIC5.66□□□□□ -1.5
HNF4AP41235 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
HNF4AP41235 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HNF4AP41235 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 BCORP1-203ENST00000513194 5093 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HNF4AP41235 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.65□□□□□ -1.5
HNF4AP41235 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.65□□□□□ -1.5
HNF4AP41235 AL136131.1-201ENST00000406079 803 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 RN7SKP240-201ENST00000410583 375 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 METTL15P3-201ENST00000415522 1221 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 AJ239321.1-201ENST00000424255 564 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.65□□□□□ -1.5
HNF4AP41235 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.65□□□□□ -1.5
HNF4AP41235 ARL4AP4-201ENST00000434170 518 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.65□□□□□ -1.5
HNF4AP41235 AL138899.2-201ENST00000439139 499 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.65□□□□□ -1.5
HNF4AP41235 STRADBP1-201ENST00000478954 1281 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 AC006499.4-201ENST00000510947 694 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 GAPDHP71-201ENST00000511530 1003 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 AC114781.3-201ENST00000512083 142 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.65□□□□□ -1.5
HNF4AP41235 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 TOMM20P1-201ENST00000534518 427 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
HNF4AP41235 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.65□□□□□ -1.5
HNF4AP41235 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.65□□□□□ -1.5
HNF4AP41235 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 AL513327.3-201ENST00000602618 469 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 NANOGP3-201ENST00000605855 286 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HNF4AP41235 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.65□□□□□ -1.5
HNF4AP41235 OR11H2-202ENST00000641517 1085 ntBASIC5.65□□□□□ -1.5
HNF4AP41235 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms