Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCLP35914 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 RN7SKP81-201ENST00000365603 331 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCLP35914 MIR551A-201ENST00000385042 96 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 FMO7P-201ENST00000436045 768 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 VDAC2P4-201ENST00000452925 711 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCLP35914 RN7SL72P-201ENST00000460697 269 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGCLP35914 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 EIF4EP5-201ENST00000528228 640 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 MRPS21P7-201ENST00000566937 238 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 RBM22P12-201ENST00000567098 1255 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC019322.1-201ENST00000571869 389 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 RN7SL787P-201ENST00000613000 284 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC126175.1-201ENST00000617041 758 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 AC010809.3-201ENST00000621310 641 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 AC103703.1-201ENST00000634783 663 ntBASIC5.57□□□□□ -1.52
HMGCLP35914 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCLP35914 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCLP35914 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCLP35914 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HMGCLP35914 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCLP35914 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCLP35914 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC027279.4-201ENST00000624371 2072 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 SNORA17A-201ENST00000391185 133 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 RNA5SP178-201ENST00000410380 128 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 RN7SKP286-201ENST00000410894 299 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 RN7SKP293-201ENST00000411389 296 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 VTI1BP4-201ENST00000427516 527 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 BX119904.3-201ENST00000428194 957 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 AZGP1P2-201ENST00000454506 345 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 RN7SL188P-201ENST00000469842 285 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCLP35914 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 UGT2A3P7-201ENST00000510485 734 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 OR5AM1P-201ENST00000532136 1032 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGCLP35914 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC010487.1-201ENST00000594408 1172 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 FO393422.1-201ENST00000603908 708 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC026124.2-201ENST00000621847 656 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 SNORA17.5-201ENST00000630429 132 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 AC073869.7-201ENST00000640874 297 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC114774.1-201ENST00000507410 1770 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC083899.1-201ENST00000454465 3819 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCLP35914 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 SYT14P1-202ENST00000600441 1448 ntBASIC5.56□□□□□ -1.52
HMGCLP35914 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCLP35914 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HMGCLP35914 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGCLP35914 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms