Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 EEF1B2P6-201ENST00000445713 673 ntBASIC6.41□□□□□ -1.38
CIITAP33076 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 AL450023.1-201ENST00000450868 751 ntBASIC6.41□□□□□ -1.38
CIITAP33076 MEMO1P4-201ENST00000453590 386 ntBASIC6.41□□□□□ -1.38
CIITAP33076 RN7SL72P-201ENST00000460697 269 ntBASIC6.41□□□□□ -1.38
CIITAP33076 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.41□□□□□ -1.38
CIITAP33076 RN7SL717P-201ENST00000478343 297 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AGGF1P3-201ENST00000493675 1213 ntBASIC6.41□□□□□ -1.38
CIITAP33076 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 RNU6-943P-201ENST00000516960 98 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.41□□□□□ -1.38
CIITAP33076 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 AC022404.1-201ENST00000555320 273 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AL049872.1-201ENST00000556323 322 ntBASIC6.41□□□□□ -1.38
CIITAP33076 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 MIR4311-201ENST00000580794 100 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.41□□□□□ -1.38
CIITAP33076 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 AC092474.3-201ENST00000603022 568 ntBASIC6.41□□□□□ -1.38
CIITAP33076 FO393422.1-201ENST00000603908 708 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 AC008115.3-201ENST00000614874 549 ntBASIC6.41□□□□□ -1.38
CIITAP33076 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.41□□□□□ -1.38
CIITAP33076 AL390318.1-201ENST00000624564 687 ntBASIC6.41□□□□□ -1.38
CIITAP33076 AL138960.2-201ENST00000625145 535 ntBASIC6.41□□□□□ -1.38
CIITAP33076 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 AL163152.1-201ENST00000642001 374 ntBASIC6.41□□□□□ -1.38
CIITAP33076 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CIITAP33076 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 AC114786.1-201ENST00000512892 1415 ntBASIC6.41□□□□□ -1.38
CIITAP33076 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CIITAP33076 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
CIITAP33076 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CIITAP33076 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.4□□□□□ -1.38
CIITAP33076 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CIITAP33076 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CIITAP33076 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CIITAP33076 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CIITAP33076 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CIITAP33076 GAPDHP24-201ENST00000328713 983 ntBASIC6.4□□□□□ -1.38
CIITAP33076 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CIITAP33076 RN7SKP269-201ENST00000365545 319 ntBASIC6.4□□□□□ -1.38
CIITAP33076 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.4□□□□□ -1.38
CIITAP33076 RMRPP5-201ENST00000411156 267 ntBASIC6.4□□□□□ -1.38
CIITAP33076 OR2AT2P-201ENST00000413438 905 ntBASIC6.4□□□□□ -1.38
CIITAP33076 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AC013410.2-201ENST00000422627 201 ntBASIC6.4□□□□□ -1.38
CIITAP33076 SETP10-201ENST00000424368 814 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.4□□□□□ -1.38
CIITAP33076 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.4□□□□□ -1.38
CIITAP33076 FMO7P-201ENST00000436045 768 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AC006335.2-201ENST00000437993 330 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AL596266.1-201ENST00000448132 400 ntBASIC6.4□□□□□ -1.38
CIITAP33076 LDHBP2-201ENST00000456969 1005 ntBASIC6.4□□□□□ -1.38
CIITAP33076 MTND2P39-201ENST00000457230 764 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AC093719.1-201ENST00000480427 441 ntBASIC6.4□□□□□ -1.38
CIITAP33076 DEFB109A-201ENST00000482450 265 ntBASIC6.4□□□□□ -1.38
CIITAP33076 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.4□□□□□ -1.38
CIITAP33076 AC138409.2-202ENST00000507274 458 ntBASIC6.4□□□□□ -1.38
CIITAP33076 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.4□□□□□ -1.38
CIITAP33076 AC021146.10-201ENST00000515628 706 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.4□□□□□ -1.38
CIITAP33076 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.4□□□□□ -1.38
CIITAP33076 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.4□□□□□ -1.38
CIITAP33076 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.4□□□□□ -1.38
CIITAP33076 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CIITAP33076 AL731537.2-201ENST00000561565 951 ntBASIC6.4□□□□□ -1.38
CIITAP33076 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.4□□□□□ -1.38
CIITAP33076 MIR1273E-201ENST00000581165 102 ntBASIC6.4□□□□□ -1.38
CIITAP33076 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.4□□□□□ -1.38
CIITAP33076 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.4□□□□□ -1.38
CIITAP33076 AC011445.2-201ENST00000599274 173 ntBASIC6.4□□□□□ -1.38
CIITAP33076 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.4□□□□□ -1.38
CIITAP33076 AP001267.4-201ENST00000602598 545 ntBASIC6.4□□□□□ -1.38
CIITAP33076 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CIITAP33076 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.4□□□□□ -1.38
CIITAP33076 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.4□□□□□ -1.39
CIITAP33076 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CIITAP33076 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CIITAP33076 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.4□□□□□ -1.39
CIITAP33076 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.4□□□□□ -1.39
CIITAP33076 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.4□□□□□ -1.39
CIITAP33076 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.39□□□□□ -1.39
CIITAP33076 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.39□□□□□ -1.39
CIITAP33076 RNA5SP242-201ENST00000364171 118 ntBASIC6.39□□□□□ -1.39
CIITAP33076 RPS6P23-201ENST00000413224 722 ntBASIC6.39□□□□□ -1.39
CIITAP33076 OR6E1P-201ENST00000414424 923 ntBASIC6.39□□□□□ -1.39
CIITAP33076 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CIITAP33076 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.39□□□□□ -1.39
CIITAP33076 RPL34P27-201ENST00000428810 349 ntBASIC6.39□□□□□ -1.39
CIITAP33076 AC242426.1-201ENST00000435270 960 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms