Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AC135626.1-201ENST00000556983 435 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 AC234775.3-201ENST00000564612 656 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 AC012146.2-201ENST00000576545 416 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AL139124.1-201ENST00000609123 421 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 AP003400.2-201ENST00000624036 666 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 AC138627.1-204ENST00000641894 765 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.94□□□□□ -1.46
CHRNA3P32297 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CHRNA3P32297 AC006206.1-201ENST00000544842 3387 ntBASIC5.94□□□□□ -1.46
CHRNA3P32297 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHRNA3P32297 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
CHRNA3P32297 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHRNA3P32297 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHRNA3P32297 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
CHRNA3P32297 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 AC018628.1-201ENST00000624147 3819 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.93□□□□□ -1.46
CHRNA3P32297 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 MTHFD2P5-201ENST00000320415 844 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 RN7SKP81-201ENST00000365603 331 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.93□□□□□ -1.46
CHRNA3P32297 MIR323B-201ENST00000385269 82 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AC005042.1-201ENST00000393397 800 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AC007068.1-201ENST00000396690 844 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AC096921.1-201ENST00000411661 375 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 MTND4LP21-201ENST00000415303 295 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AK4P4-201ENST00000419465 646 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.93□□□□□ -1.46
CHRNA3P32297 TMEM183AP1-205ENST00000432739 290 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.93□□□□□ -1.46
CHRNA3P32297 AL391987.1-201ENST00000441025 200 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 RPL36AP39-201ENST00000445859 318 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 HMGN1P36-201ENST00000446623 298 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 PPIAP20-201ENST00000449839 135 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 SUMO2P4-201ENST00000504193 276 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.93□□□□□ -1.46
CHRNA3P32297 AC074255.1-201ENST00000511259 501 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.93□□□□□ -1.46
CHRNA3P32297 SEPT10P1-201ENST00000517342 1162 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHRNA3P32297 AP001496.3-201ENST00000580230 913 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 MIR6862-1-201ENST00000613016 70 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 MIR6862-2-201ENST00000614755 70 ntBASIC5.93□□□□□ -1.46
CHRNA3P32297 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CHRNA3P32297 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHRNA3P32297 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHRNA3P32297 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.92□□□□□ -1.46
CHRNA3P32297 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CHRNA3P32297 OR13C1P-202ENST00000641378 2919 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 U3.28-201ENST00000391249 210 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 RNA5SP178-201ENST00000410380 128 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 AC079809.1-201ENST00000415468 276 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 OR5W1P-201ENST00000423705 938 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.92□□□□□ -1.46
CHRNA3P32297 RN7SL273P-201ENST00000481561 299 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 ATP5LP5-201ENST00000483050 299 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 NENFP3-201ENST00000503735 313 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 AC112191.2-201ENST00000522428 333 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 IGLV3-30-201ENST00000524362 298 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.92□□□□□ -1.46
CHRNA3P32297 AC122688.1-201ENST00000541494 223 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.92□□□□□ -1.46
CHRNA3P32297 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.92□□□□□ -1.46
CHRNA3P32297 AC087468.1-201ENST00000604365 630 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 AC096586.2-201ENST00000610260 441 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 AC126175.1-201ENST00000617041 758 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 MIR6729-201ENST00000618194 65 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.92□□□□□ -1.46
CHRNA3P32297 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.92□□□□□ -1.46
CHRNA3P32297 MIR193BHG-214ENST00000641765 509 ntBASIC5.92□□□□□ -1.46
CHRNA3P32297 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHRNA3P32297 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms