Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.06□□□□□ -1.28
CNGA1P29973 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.06□□□□□ -1.28
CNGA1P29973 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.06□□□□□ -1.28
CNGA1P29973 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.06□□□□□ -1.28
CNGA1P29973 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNGA1P29973 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNGA1P29973 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CNGA1P29973 AC005618.1-201ENST00000606901 3148 ntBASIC7.06□□□□□ -1.28
CNGA1P29973 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CNGA1P29973 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CNGA1P29973 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNGA1P29973 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
CNGA1P29973 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CNGA1P29973 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.06□□□□□ -1.28
CNGA1P29973 AC008432.1-201ENST00000615912 1320 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.05□□□□□ -1.28
CNGA1P29973 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 RNA5SP350-201ENST00000363298 111 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 RN7SKP28-201ENST00000364770 305 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 RN7SKP292-201ENST00000365522 317 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 RNU6-796P-201ENST00000391086 107 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 U3.25-201ENST00000391209 220 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 RPL22P22-201ENST00000395439 379 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 RN7SKP161-201ENST00000411110 305 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 RPS7P8-201ENST00000418311 581 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 NDUFS5P5-201ENST00000437256 321 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 PPIAP10-201ENST00000438675 458 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 AC128716.1-201ENST00000475129 166 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 RN7SL193P-201ENST00000491708 276 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AL136038.1-201ENST00000497246 351 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 OR5H3P-201ENST00000502817 919 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.05□□□□□ -1.28
CNGA1P29973 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 AP003066.2-201ENST00000529375 555 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.05□□□□□ -1.28
CNGA1P29973 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.05□□□□□ -1.28
CNGA1P29973 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.05□□□□□ -1.28
CNGA1P29973 AC007225.2-201ENST00000562529 256 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.05□□□□□ -1.28
CNGA1P29973 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.05□□□□□ -1.28
CNGA1P29973 FAM72A-208ENST00000607379 1139 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AC019131.2-201ENST00000609071 870 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.05□□□□□ -1.28
CNGA1P29973 AC090506.2-201ENST00000624521 419 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.05□□□□□ -1.28
CNGA1P29973 AL132640.3-201ENST00000630473 177 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CNGA1P29973 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.05□□□□□ -1.28
CNGA1P29973 MTND5P11-201ENST00000511037 1812 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 CR788268.1-201ENST00000603931 1809 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 SHQ1P1-201ENST00000437111 1544 ntBASIC7.05□□□□□ -1.28
CNGA1P29973 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.05□□□□□ -1.28
CNGA1P29973 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CNGA1P29973 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.05□□□□□ -1.28
CNGA1P29973 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 AL662795.2-201ENST00000624252 3706 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.04□□□□□ -1.28
CNGA1P29973 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.04□□□□□ -1.28
CNGA1P29973 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.04□□□□□ -1.28
CNGA1P29973 AC011455.2-201ENST00000599320 3336 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CNGA1P29973 RNU6-354P-201ENST00000383862 107 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 RNU6-610P-201ENST00000384264 107 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.04□□□□□ -1.28
CNGA1P29973 HYALP1-201ENST00000417674 1279 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 BX510359.3-201ENST00000422168 306 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 NDUFA5P10-201ENST00000432147 357 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CNGA1P29973 PA2G4P6-201ENST00000438325 1197 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AC064862.4-201ENST00000442180 334 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.04□□□□□ -1.28
CNGA1P29973 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CNGA1P29973 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.04□□□□□ -1.28
CNGA1P29973 GTF2IP9-201ENST00000502460 301 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 TRAV31-201ENST00000502780 342 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AC010343.2-201ENST00000510162 224 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.04□□□□□ -1.28
CNGA1P29973 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.04□□□□□ -1.28
CNGA1P29973 MTCYBP19-201ENST00000517463 1124 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 AP001372.4-201ENST00000524889 472 ntBASIC7.04□□□□□ -1.28
CNGA1P29973 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms