Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC023271.1-201ENST00000445936 1090 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 OR7E116P-201ENST00000448529 957 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AC093166.4-201ENST00000457867 318 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN6P29350 RN7SL197P-201ENST00000466981 299 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN6P29350 DEFB109A-201ENST00000482450 265 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN6P29350 AC113398.2-201ENST00000507630 558 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AC114781.3-201ENST00000512083 142 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 RNA5SP271-201ENST00000516700 88 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AC139365.2-201ENST00000517972 253 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN6P29350 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.42□□□□□ -1.54
PTPN6P29350 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN6P29350 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN6P29350 DHFRP1-201ENST00000579682 559 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AC010615.3-201ENST00000597319 394 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AP005212.4-201ENST00000614206 710 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 MIR6133-201ENST00000617057 108 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 AC099654.6-201ENST00000636487 512 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTPN6P29350 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PTPN6P29350 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PTPN6P29350 AL591135.1-201ENST00000401578 5914 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTPN6P29350 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN6P29350 SMG1P7-201ENST00000565246 2704 ntBASIC5.42□□□□□ -1.54
PTPN6P29350 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN6P29350 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
PTPN6P29350 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN6P29350 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN6P29350 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN6P29350 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN6P29350 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 LINC02019-201ENST00000608605 2060 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 PARP4P2-201ENST00000446672 3326 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 RNA5SP326-201ENST00000363209 110 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 RNU6-729P-201ENST00000384399 107 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTPN6P29350 RN7SKP29-201ENST00000410957 272 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AC096921.1-201ENST00000411661 375 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN6P29350 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN6P29350 IPPKP1-201ENST00000422501 768 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 RPS27AP6-201ENST00000427962 448 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 DEFA9P-201ENST00000433042 285 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN6P29350 PCBP2P1-201ENST00000437262 977 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AL138787.1-202ENST00000437804 898 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN6P29350 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 DUTP1-201ENST00000493631 470 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AP000926.3-201ENST00000497201 299 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.41□□□□□ -1.54
PTPN6P29350 IGLV3-30-201ENST00000524362 298 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.41□□□□□ -1.54
PTPN6P29350 PCNAP4-201ENST00000532690 730 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.41□□□□□ -1.54
PTPN6P29350 AL358913.1-201ENST00000554342 121 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 AC096996.1-201ENST00000563813 325 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN6P29350 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN6P29350 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.41□□□□□ -1.54
PTPN6P29350 AL356608.1-201ENST00000610034 820 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 AC074140.1-201ENST00000621617 208 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.41□□□□□ -1.54
PTPN6P29350 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.41□□□□□ -1.54
PTPN6P29350 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
PTPN6P29350 AC097461.1-201ENST00000568928 2821 ntBASIC5.41□□□□□ -1.54
PTPN6P29350 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN6P29350 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms