Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC245100.7-201ENST00000609678 442 ntBASIC8.08□□□□□ -1.12
RXRBP28702 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 AC026367.3-201ENST00000619032 590 ntBASIC8.08□□□□□ -1.12
RXRBP28702 AC090582.1-201ENST00000636321 199 ntBASIC8.08□□□□□ -1.12
RXRBP28702 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 SGO1P1-201ENST00000603525 1447 ntBASIC8.08□□□□□ -1.12
RXRBP28702 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.08□□□□□ -1.12
RXRBP28702 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
RXRBP28702 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.08□□□□□ -1.12
RXRBP28702 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.07□□□□□ -1.12
RXRBP28702 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 SPATA31C2-201ENST00000324915 3777 ntBASIC8.07□□□□□ -1.12
RXRBP28702 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.07□□□□□ -1.12
RXRBP28702 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 AC010132.2-201ENST00000295493 1043 ntBASIC8.07□□□□□ -1.12
RXRBP28702 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RXRBP28702 AL096829.1-201ENST00000413677 457 ntBASIC8.07□□□□□ -1.12
RXRBP28702 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 OFD1P11Y-201ENST00000418213 1177 ntBASIC8.07□□□□□ -1.12
RXRBP28702 TIMM9P2-201ENST00000419324 266 ntBASIC8.07□□□□□ -1.12
RXRBP28702 SEPT2P1-201ENST00000419651 180 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC005033.1-201ENST00000428904 813 ntBASIC8.07□□□□□ -1.12
RXRBP28702 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.07□□□□□ -1.12
RXRBP28702 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC8.07□□□□□ -1.12
RXRBP28702 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 RPS21P4-201ENST00000487122 248 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.07□□□□□ -1.12
RXRBP28702 ATG10-AS1-201ENST00000504846 648 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC109927.2-201ENST00000506416 303 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC118282.2-201ENST00000508739 374 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC106800.3-201ENST00000511389 308 ntBASIC8.07□□□□□ -1.12
RXRBP28702 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.07□□□□□ -1.12
RXRBP28702 AC096996.1-201ENST00000563813 325 ntBASIC8.07□□□□□ -1.12
RXRBP28702 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.07□□□□□ -1.12
RXRBP28702 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC8.07□□□□□ -1.12
RXRBP28702 VN1R78P-201ENST00000597393 564 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AL353778.1-201ENST00000603149 408 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC004987.4-201ENST00000603383 338 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC107304.1-201ENST00000604229 296 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC010245.2-201ENST00000606908 1167 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC006338.2-201ENST00000616864 791 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC009704.2-201ENST00000618739 483 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC021422.1-201ENST00000621212 473 ntBASIC8.07□□□□□ -1.12
RXRBP28702 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.07□□□□□ -1.12
RXRBP28702 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RXRBP28702 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
RXRBP28702 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.06□□□□□ -1.12
RXRBP28702 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.06□□□□□ -1.12
RXRBP28702 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.06□□□□□ -1.12
RXRBP28702 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
RXRBP28702 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RXRBP28702 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RXRBP28702 RNU6-152P-201ENST00000384037 107 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AL109941.1-201ENST00000401925 229 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AL139039.2-201ENST00000407436 479 ntBASIC8.06□□□□□ -1.12
RXRBP28702 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC8.06□□□□□ -1.12
RXRBP28702 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.06□□□□□ -1.12
RXRBP28702 BTF3L4P1-201ENST00000413813 468 ntBASIC8.06□□□□□ -1.12
RXRBP28702 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC8.06□□□□□ -1.12
RXRBP28702 RPL7L1P9-201ENST00000431298 745 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.06□□□□□ -1.12
RXRBP28702 HMGB3P24-201ENST00000433260 622 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AL138878.2-201ENST00000440581 1241 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC8.06□□□□□ -1.12
RXRBP28702 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.06□□□□□ -1.12
RXRBP28702 AC092967.1-201ENST00000449016 481 ntBASIC8.06□□□□□ -1.12
RXRBP28702 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RXRBP28702 RN7SL583P-201ENST00000475692 287 ntBASIC8.06□□□□□ -1.12
RXRBP28702 AC126121.1-201ENST00000482313 553 ntBASIC8.06□□□□□ -1.12
RXRBP28702 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms