Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.61□□□□□ -1.51
XRCC1P18887 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 GAPDHP62-201ENST00000515313 990 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 AC022404.1-201ENST00000555320 273 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 AC027216.1-201ENST00000577726 685 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 AC063977.5-201ENST00000601044 974 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.61□□□□□ -1.51
XRCC1P18887 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 MAPK10-328ENST00000641553 4009 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 AC020656.2-201ENST00000613291 5309 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 MFSD8-239ENST00000641590 2479 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.6□□□□□ -1.51
XRCC1P18887 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
XRCC1P18887 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 RNA5SP242-201ENST00000364171 118 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 SNORA70.6-201ENST00000383934 134 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.6□□□□□ -1.51
XRCC1P18887 AC079809.1-201ENST00000415468 276 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.6□□□□□ -1.51
XRCC1P18887 NIFKP3-201ENST00000417799 865 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.6□□□□□ -1.51
XRCC1P18887 GAPDHP48-201ENST00000436626 961 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.6□□□□□ -1.51
XRCC1P18887 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.6□□□□□ -1.51
XRCC1P18887 RPSAP39-201ENST00000467439 883 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
XRCC1P18887 AC006539.1-201ENST00000481419 501 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 DEFB109A-201ENST00000482450 265 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC090142.2-201ENST00000483263 416 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 RPS3AP15-201ENST00000483874 781 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 RPL32P33-201ENST00000487023 394 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.6□□□□□ -1.51
XRCC1P18887 AL136038.1-201ENST00000497246 351 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC138866.2-201ENST00000508650 584 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.6□□□□□ -1.51
XRCC1P18887 MRPS16P1-201ENST00000523462 412 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.6□□□□□ -1.51
XRCC1P18887 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.6□□□□□ -1.51
XRCC1P18887 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.6□□□□□ -1.51
XRCC1P18887 AC090286.3-201ENST00000573133 187 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.6□□□□□ -1.51
XRCC1P18887 SNORD95-201ENST00000579879 68 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.6□□□□□ -1.51
XRCC1P18887 FO393422.1-201ENST00000603908 708 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.6□□□□□ -1.51
XRCC1P18887 MIR6768-201ENST00000610734 72 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AL691477.1-201ENST00000624398 162 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 AC132825.8-201ENST00000640783 297 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
XRCC1P18887 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.6□□□□□ -1.51
XRCC1P18887 MFSD8-219ENST00000641228 2559 ntBASIC5.6□□□□□ -1.51
XRCC1P18887 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 UGT2B24P-201ENST00000514441 1597 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
XRCC1P18887 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 AC007842.1-201ENST00000597336 2039 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.59□□□□□ -1.51
XRCC1P18887 AL121776.1-201ENST00000429337 372 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 AC004129.2-201ENST00000457229 287 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 AC018638.3-201ENST00000461273 132 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC073610.1-201ENST00000489971 396 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC011411.1-201ENST00000509592 876 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.59□□□□□ -1.51
XRCC1P18887 OR4A43P-201ENST00000532938 908 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms