Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DHFRP1-201ENST00000579682 559 ntBASIC5.96□□□□□ -1.46
PDGFRAP16234 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFRAP16234 RN7SL544P-201ENST00000617232 284 ntBASIC5.96□□□□□ -1.46
PDGFRAP16234 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 RN7SL763P-201ENST00000620922 284 ntBASIC5.96□□□□□ -1.46
PDGFRAP16234 MTCO1P1-201ENST00000624263 1081 ntBASIC5.96□□□□□ -1.46
PDGFRAP16234 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFRAP16234 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 SNORA17.5-201ENST00000630429 132 ntBASIC5.96□□□□□ -1.46
PDGFRAP16234 MIR193BHG-214ENST00000641765 509 ntBASIC5.96□□□□□ -1.46
PDGFRAP16234 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
PDGFRAP16234 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
PDGFRAP16234 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFRAP16234 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDGFRAP16234 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
PDGFRAP16234 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFRAP16234 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC007342.9-201ENST00000623877 1385 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDGFRAP16234 HMGB1P20-201ENST00000402555 677 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 AC096921.1-201ENST00000411661 375 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFRAP16234 SUMO2P3-201ENST00000438311 288 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AL391987.1-201ENST00000441025 200 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 AL157385.1-201ENST00000446973 268 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 NXT1P1-201ENST00000458481 316 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC147055.1-201ENST00000509261 750 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 GAPDHP62-201ENST00000515313 990 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC027544.3-201ENST00000535082 757 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AP001496.3-201ENST00000580230 913 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 OR8G7P-201ENST00000616658 848 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 AC087565.3-203ENST00000641018 837 ntBASIC5.95□□□□□ -1.46
PDGFRAP16234 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFRAP16234 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFRAP16234 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFRAP16234 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFRAP16234 AP005432.1-201ENST00000580891 3485 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFRAP16234 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFRAP16234 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 RPS6P23-201ENST00000413224 722 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 AC096644.3-201ENST00000416788 338 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 RFESDP1-201ENST00000422350 461 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFRAP16234 AC064862.4-201ENST00000442180 334 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.94□□□□□ -1.46
PDGFRAP16234 RPS23P6-201ENST00000466136 431 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 OR7E157P-201ENST00000494376 911 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 CYCSP22-201ENST00000517555 339 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 HMGB1P42-201ENST00000532126 553 ntBASIC5.94□□□□□ -1.46
PDGFRAP16234 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFRAP16234 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFRAP16234 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms