Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC9.15□□□□□ -0.95
CFTRP13569 AC008814.1-201ENST00000603797 406 ntBASIC9.15□□□□□ -0.95
CFTRP13569 AL683813.2-201ENST00000605245 502 ntBASIC9.15□□□□□ -0.95
CFTRP13569 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC9.15□□□□□ -0.95
CFTRP13569 UGP2-232ENST00000640075 567 ntTSL 5 BASIC9.15□□□□□ -0.95
CFTRP13569 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
CFTRP13569 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 OR4F13P-202ENST00000560066 2054 ntBASIC9.14□□□□□ -0.95
CFTRP13569 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 AC009962.1-201ENST00000567327 3813 ntBASIC9.14□□□□□ -0.95
CFTRP13569 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC9.14□□□□□ -0.95
CFTRP13569 RN7SKP100-201ENST00000411258 284 ntBASIC9.14□□□□□ -0.95
CFTRP13569 RPL18P10-201ENST00000425606 538 ntBASIC9.14□□□□□ -0.95
CFTRP13569 AL359265.2-201ENST00000434367 631 ntBASIC9.14□□□□□ -0.95
CFTRP13569 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.14□□□□□ -0.95
CFTRP13569 AC008147.3-201ENST00000548666 354 ntBASIC9.14□□□□□ -0.95
CFTRP13569 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
CFTRP13569 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC9.14□□□□□ -0.95
CFTRP13569 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC9.14□□□□□ -0.95
CFTRP13569 AL391358.1-201ENST00000605342 190 ntBASIC9.14□□□□□ -0.95
CFTRP13569 AC012414.7-202ENST00000622705 1090 ntBASIC9.14□□□□□ -0.95
CFTRP13569 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CFTRP13569 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
CFTRP13569 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CFTRP13569 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC9.13□□□□□ -0.95
CFTRP13569 SNORA70.2-201ENST00000364506 135 ntBASIC9.13□□□□□ -0.95
CFTRP13569 AL121977.1-201ENST00000401636 979 ntBASIC9.13□□□□□ -0.95
CFTRP13569 HSPD1P12-201ENST00000429127 1069 ntBASIC9.13□□□□□ -0.95
CFTRP13569 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC9.13□□□□□ -0.95
CFTRP13569 AC068587.1-201ENST00000483613 781 ntBASIC9.13□□□□□ -0.95
CFTRP13569 AC140172.1-201ENST00000502928 141 ntBASIC9.13□□□□□ -0.95
CFTRP13569 AC087360.1-201ENST00000518788 616 ntBASIC9.13□□□□□ -0.95
CFTRP13569 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.13□□□□□ -0.95
CFTRP13569 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CFTRP13569 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
CFTRP13569 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.12□□□□□ -0.95
CFTRP13569 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CFTRP13569 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC9.12□□□□□ -0.95
CFTRP13569 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
CFTRP13569 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC9.12□□□□□ -0.95
CFTRP13569 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC9.12□□□□□ -0.95
CFTRP13569 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC9.12□□□□□ -0.95
CFTRP13569 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC9.12□□□□□ -0.95
CFTRP13569 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC9.12□□□□□ -0.95
CFTRP13569 AC079168.1-201ENST00000458741 345 ntBASIC9.12□□□□□ -0.95
CFTRP13569 HMGN2P25-201ENST00000486956 268 ntBASIC9.12□□□□□ -0.95
CFTRP13569 HPRT1P1-201ENST00000509498 657 ntBASIC9.12□□□□□ -0.95
CFTRP13569 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC9.12□□□□□ -0.95
CFTRP13569 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC9.12□□□□□ -0.95
CFTRP13569 AC091042.1-201ENST00000579213 173 ntBASIC9.12□□□□□ -0.95
CFTRP13569 RN7SL690P-201ENST00000582087 240 ntBASIC9.12□□□□□ -0.95
CFTRP13569 AC020910.2-201ENST00000603635 610 ntBASIC9.12□□□□□ -0.95
CFTRP13569 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
CFTRP13569 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CFTRP13569 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
CFTRP13569 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
CFTRP13569 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CFTRP13569 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
CFTRP13569 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 RNA5SP113-201ENST00000410486 84 ntBASIC9.11□□□□□ -0.95
CFTRP13569 AC093414.1-201ENST00000434712 514 ntBASIC9.11□□□□□ -0.95
CFTRP13569 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CFTRP13569 RNA5SP43-201ENST00000516559 110 ntBASIC9.11□□□□□ -0.95
CFTRP13569 RN7SKP98-201ENST00000517070 156 ntBASIC9.11□□□□□ -0.95
CFTRP13569 AC005034.3-201ENST00000604845 1747 ntBASIC9.11□□□□□ -0.95
CFTRP13569 AL359195.2-201ENST00000623657 4412 ntBASIC9.11□□□□□ -0.95
CFTRP13569 AC016717.3-201ENST00000624730 554 ntBASIC9.11□□□□□ -0.95
CFTRP13569 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC9.11□□□□□ -0.95
CFTRP13569 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CFTRP13569 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CFTRP13569 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.11□□□□□ -0.95
CFTRP13569 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CFTRP13569 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms