Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HMGB1P09429 RNU4-44P-201ENST00000363050 141 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC019050.1-201ENST00000418508 492 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC016027.5-201ENST00000427227 210 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 IGLV3-4-201ENST00000432300 244 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 RPL12P49-201ENST00000441100 121 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 MTND6P6-201ENST00000478031 263 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P09429 POLR2KP1-201ENST00000553226 168 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC005632.2-201ENST00000564271 828 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 AL138960.1-201ENST00000613838 513 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 AC010325.3-201ENST00000641084 394 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 TCP1P3-201ENST00000414406 1498 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGB1P09429 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
HMGB1P09429 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.34□□□□□ -1.24
HMGB1P09429 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.34□□□□□ -1.24
HMGB1P09429 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.34□□□□□ -1.24
HMGB1P09429 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
HMGB1P09429 AC024341.1-201ENST00000526444 1552 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGB1P09429 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 AC114546.3-201ENST00000623582 1734 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 AL451142.2-201ENST00000429076 2090 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
HMGB1P09429 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 RN7SKP184-201ENST00000362348 333 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 RNU6-252P-201ENST00000363232 107 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 RNA5SP198-201ENST00000410376 127 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 GSTM3P2-201ENST00000412746 530 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGB1P09429 AL390879.2-203ENST00000426943 1121 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGB1P09429 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.33□□□□□ -1.24
HMGB1P09429 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 AL645936.1-201ENST00000441979 518 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGB1P09429 TPTE2P6-202ENST00000445572 1007 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGB1P09429 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGB1P09429 AC090958.1-201ENST00000511122 351 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGB1P09429 MRPS5P3-201ENST00000515577 166 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGB1P09429 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGB1P09429 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGB1P09429 MT1CP-201ENST00000567054 174 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 MIR5010-201ENST00000582846 120 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 AC092474.3-201ENST00000603022 568 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 AC027334.1-201ENST00000603257 310 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 AL355816.1-201ENST00000607951 118 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 U6.48-201ENST00000618523 106 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 AL445493.3-201ENST00000619568 477 ntBASIC7.33□□□□□ -1.24
HMGB1P09429 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGB1P09429 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms