Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU6-1193P-201ENST00000459461 107 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AC104164.1-201ENST00000460282 590 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AC023194.2-201ENST00000465398 406 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AC083795.1-201ENST00000491760 320 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC117525.1-201ENST00000515228 503 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AC027369.2-201ENST00000528030 440 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC007346.2-201ENST00000564816 892 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.06□□□□□ -1.6
SFTPBP07988 RN7SL753P-201ENST00000581238 290 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.06□□□□□ -1.6
SFTPBP07988 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.06□□□□□ -1.6
SFTPBP07988 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC068768.2-201ENST00000602352 343 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 RNU6-368P-201ENST00000620928 107 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 RNU6-538P-201ENST00000622329 107 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 AC114774.1-201ENST00000507410 1770 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 AC008627.1-201ENST00000517511 1704 ntBASIC5.06□□□□□ -1.6
SFTPBP07988 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SFTPBP07988 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SFTPBP07988 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.05□□□□□ -1.6
SFTPBP07988 RN7SKP128-201ENST00000364270 303 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 U3.10-201ENST00000364459 214 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 RNA5SP211-201ENST00000365516 117 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 RNU2-22P-201ENST00000411266 212 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.05□□□□□ -1.6
SFTPBP07988 VTI1BP4-201ENST00000427516 527 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 YY1P1-201ENST00000427625 668 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.05□□□□□ -1.6
SFTPBP07988 PPIAP27-201ENST00000453800 265 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 AL603882.1-201ENST00000463059 681 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 PSMA2P2-201ENST00000504319 686 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 ASNSP4-201ENST00000511103 447 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 AC111000.6-201ENST00000514471 709 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 RNA5SP340-201ENST00000517132 107 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 AC104997.1-201ENST00000519761 717 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.05□□□□□ -1.6
SFTPBP07988 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.05□□□□□ -1.6
SFTPBP07988 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.05□□□□□ -1.6
SFTPBP07988 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.05□□□□□ -1.6
SFTPBP07988 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.05□□□□□ -1.6
SFTPBP07988 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.05□□□□□ -1.6
SFTPBP07988 AC067773.1-201ENST00000603284 1094 ntBASIC5.05□□□□□ -1.6
SFTPBP07988 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.05□□□□□ -1.6
SFTPBP07988 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.05□□□□□ -1.6
SFTPBP07988 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SFTPBP07988 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.05□□□□□ -1.6
SFTPBP07988 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SFTPBP07988 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 AC068870.3-201ENST00000625077 2536 ntBASIC5.04□□□□□ -1.6
SFTPBP07988 RBMY1HP-201ENST00000382759 1389 ntBASIC5.04□□□□□ -1.6
SFTPBP07988 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
SFTPBP07988 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SFTPBP07988 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.04□□□□□ -1.6
SFTPBP07988 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.04□□□□□ -1.6
SFTPBP07988 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SFTPBP07988 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SFTPBP07988 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SFTPBP07988 SNRPEP6-201ENST00000407465 277 ntBASIC5.04□□□□□ -1.6
SFTPBP07988 AC099677.3-201ENST00000427081 395 ntBASIC5.04□□□□□ -1.6
SFTPBP07988 MGAT2P2-201ENST00000427194 797 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms