Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.6□□□□□ -1.67
CTSDP07339 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.6□□□□□ -1.67
CTSDP07339 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTSDP07339 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTSDP07339 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CTSDP07339 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.6□□□□□ -1.67
CTSDP07339 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTSDP07339 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTSDP07339 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CTSDP07339 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.6□□□□□ -1.67
CTSDP07339 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.6□□□□□ -1.67
CTSDP07339 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CTSDP07339 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CTSDP07339 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.59□□□□□ -1.67
CTSDP07339 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.67
CTSDP07339 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 AL159987.1-201ENST00000347911 293 ntBASIC4.59□□□□□ -1.67
CTSDP07339 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 RNU1-65P-201ENST00000363919 148 ntBASIC4.59□□□□□ -1.67
CTSDP07339 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 RPL21P67-201ENST00000402896 478 ntBASIC4.59□□□□□ -1.67
CTSDP07339 RPSAP35-201ENST00000413753 818 ntBASIC4.59□□□□□ -1.67
CTSDP07339 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 HSPD1P9-201ENST00000420325 1636 ntBASIC4.59□□□□□ -1.67
CTSDP07339 PDZK1P1-202ENST00000425209 1350 ntBASIC4.59□□□□□ -1.67
CTSDP07339 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.59□□□□□ -1.67
CTSDP07339 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.59□□□□□ -1.67
CTSDP07339 AC009963.3-201ENST00000458090 486 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC098847.1-201ENST00000473094 348 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC069304.1-201ENST00000491593 704 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AL158068.1-201ENST00000506116 616 ntBASIC4.59□□□□□ -1.67
CTSDP07339 IMPA1P1-201ENST00000510718 842 ntBASIC4.59□□□□□ -1.67
CTSDP07339 SETP21-201ENST00000514799 892 ntBASIC4.59□□□□□ -1.67
CTSDP07339 HMGN1P9-201ENST00000515212 298 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC021678.3-201ENST00000517893 476 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC011853.1-201ENST00000518911 454 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.59□□□□□ -1.67
CTSDP07339 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.59□□□□□ -1.67
CTSDP07339 WBP1LP3-201ENST00000523033 208 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC027369.5-201ENST00000533838 755 ntBASIC4.59□□□□□ -1.67
CTSDP07339 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.59□□□□□ -1.67
CTSDP07339 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.59□□□□□ -1.67
CTSDP07339 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.59□□□□□ -1.67
CTSDP07339 LSM3P2-201ENST00000551246 273 ntBASIC4.59□□□□□ -1.67
CTSDP07339 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.59□□□□□ -1.67
CTSDP07339 AL845552.1-201ENST00000556820 323 ntBASIC4.59□□□□□ -1.67
CTSDP07339 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTSDP07339 AC124916.2-201ENST00000604416 224 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AF287957.1-201ENST00000607368 1595 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.59□□□□□ -1.67
CTSDP07339 AC024884.1-201ENST00000620583 399 ntBASIC4.59□□□□□ -1.67
CTSDP07339 AC073592.6-201ENST00000624271 415 ntBASIC4.59□□□□□ -1.67
CTSDP07339 PCAT14-202ENST00000627127 3935 ntBASIC4.59□□□□□ -1.67
CTSDP07339 MUC2-202ENST00000613187 4845 ntBASIC4.59□□□□□ -1.68
CTSDP07339 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTSDP07339 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CTSDP07339 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTSDP07339 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTSDP07339 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 RNA5SP30-201ENST00000365552 115 ntBASIC4.58□□□□□ -1.68
CTSDP07339 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTSDP07339 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 MRPL53P1-201ENST00000414323 319 ntBASIC4.58□□□□□ -1.68
CTSDP07339 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 PCNPP4-201ENST00000414817 517 ntBASIC4.58□□□□□ -1.68
CTSDP07339 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 NENFP1-201ENST00000419476 466 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 RPL6P30-201ENST00000443382 862 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 RPL32P33-201ENST00000487023 394 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.58□□□□□ -1.68
CTSDP07339 HSD3BP3-201ENST00000514706 994 ntBASIC4.58□□□□□ -1.68
CTSDP07339 SCARNA20.4-201ENST00000516969 131 ntBASIC4.58□□□□□ -1.68
CTSDP07339 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.58□□□□□ -1.68
CTSDP07339 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTSDP07339 AC006530.1-201ENST00000555980 571 ntBASIC4.58□□□□□ -1.68
CTSDP07339 RPA2P1-201ENST00000556557 721 ntBASIC4.58□□□□□ -1.68
CTSDP07339 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.58□□□□□ -1.68
CTSDP07339 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms