Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL2A1P02458 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.41□□□□□ -1.38
COL2A1P02458 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
COL2A1P02458 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 RNA5SP305-201ENST00000362665 119 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 OR4K12P-201ENST00000406538 961 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AC016397.1-201ENST00000412463 242 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 RPS11P7-201ENST00000442125 465 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 IGBP1P3-201ENST00000447449 1000 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC127381.1-201ENST00000555979 939 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC009237.13-201ENST00000603193 276 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AC069542.2-201ENST00000624816 216 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
COL2A1P02458 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.4□□□□□ -1.38
COL2A1P02458 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL2A1P02458 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL2A1P02458 HSPA8P18-201ENST00000439846 1928 ntBASIC6.4□□□□□ -1.38
COL2A1P02458 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL2A1P02458 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL2A1P02458 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.4□□□□□ -1.38
COL2A1P02458 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.4□□□□□ -1.39
COL2A1P02458 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL2A1P02458 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL2A1P02458 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.4□□□□□ -1.39
COL2A1P02458 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.4□□□□□ -1.39
COL2A1P02458 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.4□□□□□ -1.39
COL2A1P02458 RPS23P9-201ENST00000448848 438 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL2A1P02458 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.4□□□□□ -1.39
COL2A1P02458 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.4□□□□□ -1.39
COL2A1P02458 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.4□□□□□ -1.39
COL2A1P02458 PRELID3BP5-201ENST00000508612 460 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 AP001922.4-201ENST00000526967 290 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 AP005403.1-201ENST00000579720 229 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.4□□□□□ -1.39
COL2A1P02458 AL353729.2-201ENST00000605859 1249 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 AP003789.1-201ENST00000617737 605 ntBASIC6.4□□□□□ -1.39
COL2A1P02458 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL2A1P02458 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.4□□□□□ -1.39
COL2A1P02458 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL2A1P02458 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.39□□□□□ -1.39
COL2A1P02458 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.39□□□□□ -1.39
COL2A1P02458 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.39□□□□□ -1.39
COL2A1P02458 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 UGT2B24P-201ENST00000514441 1597 ntBASIC6.39□□□□□ -1.39
COL2A1P02458 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.39□□□□□ -1.39
COL2A1P02458 PANDAR-201ENST00000629595 1506 ntBASIC6.39□□□□□ -1.39
COL2A1P02458 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.39□□□□□ -1.39
COL2A1P02458 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL2A1P02458 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.39□□□□□ -1.39
COL2A1P02458 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.39□□□□□ -1.39
COL2A1P02458 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.39□□□□□ -1.39
COL2A1P02458 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.39□□□□□ -1.39
COL2A1P02458 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.39□□□□□ -1.39
COL2A1P02458 AC109462.1-201ENST00000491087 368 ntBASIC6.39□□□□□ -1.39
COL2A1P02458 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.39□□□□□ -1.39
COL2A1P02458 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.39□□□□□ -1.39
COL2A1P02458 AL512310.9-201ENST00000553311 948 ntBASIC6.39□□□□□ -1.39
COL2A1P02458 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.39□□□□□ -1.39
COL2A1P02458 AC009163.6-201ENST00000612367 342 ntBASIC6.39□□□□□ -1.39
COL2A1P02458 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.39□□□□□ -1.39
COL2A1P02458 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL2A1P02458 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.39□□□□□ -1.39
COL2A1P02458 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.39□□□□□ -1.39
COL2A1P02458 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL2A1P02458 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.38□□□□□ -1.39
COL2A1P02458 Z95114.1-201ENST00000624264 14574 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms