Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KDELR3O43731 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KDELR3O43731 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
KDELR3O43731 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KDELR3O43731 AC018809.2-201ENST00000602436 3823 ntBASIC5.63□□□□□ -1.51
KDELR3O43731 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
KDELR3O43731 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.63□□□□□ -1.51
KDELR3O43731 CDY11P-201ENST00000447168 1651 ntBASIC5.63□□□□□ -1.51
KDELR3O43731 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.62□□□□□ -1.51
KDELR3O43731 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 BCORP1-203ENST00000513194 5093 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 AC144833.1-201ENST00000567953 4089 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AC123769.1-201ENST00000530992 3192 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 RNA5SP234-201ENST00000363916 119 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 U3.25-201ENST00000391209 220 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 OR3A2-201ENST00000408891 1076 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 RPSAP35-201ENST00000413753 818 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 REG1CP-206ENST00000447469 496 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 RN7SL51P-201ENST00000468230 285 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AC100832.1-201ENST00000471945 383 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 EIF1P7-201ENST00000487533 337 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.62□□□□□ -1.51
KDELR3O43731 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.62□□□□□ -1.51
KDELR3O43731 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 RN7SKP99-201ENST00000517028 307 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.62□□□□□ -1.51
KDELR3O43731 AC078878.1-201ENST00000539832 958 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 HNRNPCP1-201ENST00000556181 766 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.62□□□□□ -1.51
KDELR3O43731 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.62□□□□□ -1.51
KDELR3O43731 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.62□□□□□ -1.51
KDELR3O43731 MIR6729-201ENST00000618194 65 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 MIR8080-201ENST00000622224 89 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AP001153.1-201ENST00000641024 338 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.62□□□□□ -1.51
KDELR3O43731 AC006206.1-201ENST00000544842 3387 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KDELR3O43731 AL442128.2-201ENST00000620246 1824 ntBASIC5.62□□□□□ -1.51
KDELR3O43731 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
KDELR3O43731 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KDELR3O43731 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KDELR3O43731 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KDELR3O43731 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KDELR3O43731 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.61□□□□□ -1.51
KDELR3O43731 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KDELR3O43731 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.61□□□□□ -1.51
KDELR3O43731 PSAT1P4-201ENST00000466500 526 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.61□□□□□ -1.51
KDELR3O43731 CR383656.1-201ENST00000484916 377 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 RN7SL184P-201ENST00000488308 297 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.61□□□□□ -1.51
KDELR3O43731 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KDELR3O43731 AC136777.2-201ENST00000522979 358 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.61□□□□□ -1.51
KDELR3O43731 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KDELR3O43731 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.61□□□□□ -1.51
KDELR3O43731 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 AP005403.1-201ENST00000579720 229 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.61□□□□□ -1.51
KDELR3O43731 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.61□□□□□ -1.51
KDELR3O43731 AC025857.2-201ENST00000602711 238 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 MIR6768-201ENST00000610734 72 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
KDELR3O43731 AC007204.2-201ENST00000615022 616 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
KDELR3O43731 AC005618.4-201ENST00000625053 554 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 AC132825.8-201ENST00000640783 297 ntBASIC5.61□□□□□ -1.51
KDELR3O43731 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KDELR3O43731 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.61□□□□□ -1.51
KDELR3O43731 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
KDELR3O43731 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.6□□□□□ -1.51
KDELR3O43731 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.6□□□□□ -1.51
KDELR3O43731 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
KDELR3O43731 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.6□□□□□ -1.51
KDELR3O43731 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.6□□□□□ -1.51
KDELR3O43731 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.6□□□□□ -1.51
KDELR3O43731 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KDELR3O43731 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KDELR3O43731 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KDELR3O43731 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KDELR3O43731 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
KDELR3O43731 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms