Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 SRRM1P3-201ENST00000426911 2678 ntBASIC6.02□□□□□ -1.45
O00370 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 RNF19BPY-201ENST00000458209 1550 ntBASIC6.01□□□□□ -1.45
O00370 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.01□□□□□ -1.45
O00370 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
O00370 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
O00370 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.01□□□□□ -1.45
O00370 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.01□□□□□ -1.45
O00370 RNA5SP326-201ENST00000363209 110 ntBASIC6.01□□□□□ -1.45
O00370 AC087752.1-201ENST00000391360 558 ntBASIC6.01□□□□□ -1.45
O00370 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
O00370 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.01□□□□□ -1.45
O00370 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.01□□□□□ -1.45
O00370 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.01□□□□□ -1.45
O00370 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.01□□□□□ -1.45
O00370 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
O00370 AL662874.1-201ENST00000426065 230 ntBASIC6.01□□□□□ -1.45
O00370 AC244033.1-201ENST00000426826 870 ntBASIC6.01□□□□□ -1.45
O00370 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
O00370 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.01□□□□□ -1.45
O00370 DUTP7-201ENST00000507982 486 ntBASIC6.01□□□□□ -1.45
O00370 IGLV3-24-201ENST00000517477 197 ntBASIC6.01□□□□□ -1.45
O00370 AC138832.1-201ENST00000522871 556 ntBASIC6.01□□□□□ -1.45
O00370 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
O00370 AC137627.1-201ENST00000545761 289 ntBASIC6.01□□□□□ -1.45
O00370 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 AC084824.2-201ENST00000548906 345 ntBASIC6.01□□□□□ -1.45
O00370 AC084033.1-201ENST00000550830 633 ntBASIC6.01□□□□□ -1.45
O00370 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.01□□□□□ -1.45
O00370 AC010503.3-201ENST00000594355 540 ntBASIC6.01□□□□□ -1.45
O00370 AP001962.1-201ENST00000624114 559 ntBASIC6.01□□□□□ -1.45
O00370 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
O00370 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
O00370 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
O00370 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
O00370 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.01□□□□□ -1.45
O00370 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
O00370 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6□□□□□ -1.45
O00370 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6□□□□□ -1.45
O00370 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6□□□□□ -1.45
O00370 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6□□□□□ -1.45
O00370 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6□□□□□ -1.45
O00370 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6□□□□□ -1.45
O00370 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6□□□□□ -1.45
O00370 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 RNA5SP131-201ENST00000365452 119 ntBASIC6□□□□□ -1.45
O00370 AC096921.1-201ENST00000411661 375 ntBASIC6□□□□□ -1.45
O00370 RPS6P23-201ENST00000413224 722 ntBASIC6□□□□□ -1.45
O00370 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6□□□□□ -1.45
O00370 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6□□□□□ -1.45
O00370 RPL12P11-201ENST00000439970 501 ntBASIC6□□□□□ -1.45
O00370 LRRC37A14P-201ENST00000452297 462 ntBASIC6□□□□□ -1.45
O00370 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6□□□□□ -1.45
O00370 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6□□□□□ -1.45
O00370 SNORA43.3-201ENST00000517240 103 ntBASIC6□□□□□ -1.45
O00370 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6□□□□□ -1.45
O00370 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6□□□□□ -1.45
O00370 AC135626.1-201ENST00000556983 435 ntBASIC6□□□□□ -1.45
O00370 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6□□□□□ -1.45
O00370 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6□□□□□ -1.45
O00370 AC010547.7-201ENST00000570323 333 ntBASIC6□□□□□ -1.45
O00370 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6□□□□□ -1.45
O00370 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6□□□□□ -1.45
O00370 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6□□□□□ -1.45
O00370 AC007786.3-201ENST00000615154 596 ntBASIC6□□□□□ -1.45
O00370 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6□□□□□ -1.45
O00370 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6□□□□□ -1.45
O00370 PWAR1-201ENST00000624188 2414 ntBASIC6□□□□□ -1.45
O00370 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6□□□□□ -1.45
O00370 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6□□□□□ -1.45
O00370 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
O00370 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
O00370 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6□□□□□ -1.45
O00370 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
O00370 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
O00370 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
O00370 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.99□□□□□ -1.45
O00370 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
O00370 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.99□□□□□ -1.45
O00370 RN7SKP145-201ENST00000363291 303 ntBASIC5.99□□□□□ -1.45
O00370 AL031985.1-201ENST00000392713 418 ntBASIC5.99□□□□□ -1.45
O00370 CDY17P-201ENST00000414121 1282 ntBASIC5.99□□□□□ -1.45
O00370 AC079809.1-201ENST00000415468 276 ntBASIC5.99□□□□□ -1.45
O00370 RPL34P3-201ENST00000421454 338 ntBASIC5.99□□□□□ -1.45
O00370 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.99□□□□□ -1.45
O00370 AC006335.2-201ENST00000437993 330 ntBASIC5.99□□□□□ -1.45
O00370 AC005297.1-201ENST00000444765 862 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms