Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC018554.2-201ENST00000563482 261 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 CSAG4-202ENST00000583763 237 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 APOC2-204ENST00000591597 447 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC012175.1-201ENST00000603755 531 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC012640.3-201ENST00000607847 430 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC015813.4-201ENST00000610469 179 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC010998.3-201ENST00000613871 631 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 NEK3-211ENST00000629912 141 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL31P11-201ENST00000426558 1558 ntBASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHKB-CPT1BH3BT56 AC117409.1-201ENST00000470499 1310 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR11H5P-202ENST00000641612 1325 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 MFSD8-239ENST00000641590 2479 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 Z98755.1-201ENST00000407015 1384 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 MIR365B-201ENST00000362317 111 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LDHAP5-201ENST00000394996 622 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR4F7P-201ENST00000402444 931 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL031229.1-201ENST00000404273 224 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR4F1P-201ENST00000405102 938 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 HDGFP1-201ENST00000405943 252 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 SNRPEP6-201ENST00000407465 277 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LSM5-202ENST00000409292 538 ntTSL 2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL356968.2-201ENST00000412769 1257 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR4F2P-201ENST00000424047 938 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 CYP4F34P-201ENST00000425951 481 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS6P12-201ENST00000432491 726 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR3D1P-201ENST00000438288 955 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 OR7E116P-201ENST00000448529 957 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 CCNJP1-201ENST00000450600 1149 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC016027.4-201ENST00000450866 277 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC098583.1-201ENST00000480875 255 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AL079303.1-201ENST00000486611 463 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SL314P-201ENST00000490735 292 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC022133.1-201ENST00000490961 571 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 RPS17P5-201ENST00000498293 408 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 NIFKP7-201ENST00000503365 834 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC016559.1-201ENST00000511420 199 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC093816.1-201ENST00000515076 913 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC090819.1-201ENST00000523800 1111 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 DEFB109D-201ENST00000529497 240 ntBASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.93□□□□□ -1.94
CHKB-CPT1BH3BT56 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms