Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AL391361.1-201ENST00000405580 489 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 NACAP7-201ENST00000407371 609 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AC009506.2-201ENST00000420635 840 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AC099670.2-201ENST00000435130 321 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AL390119.1-201ENST00000440329 312 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 CYCSP51-201ENST00000443545 318 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AC073072.2-201ENST00000447425 348 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AP000547.1-201ENST00000454360 617 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 DUTP1-201ENST00000493631 470 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 HSPE1P2-201ENST00000554777 306 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 MIR3176-201ENST00000582210 90 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 AC090607.5-201ENST00000615692 224 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 ADAM24P-201ENST00000398655 2101 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AP001284.1-201ENST00000528393 2118 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 NENFP1-201ENST00000419476 466 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AC074386.1-201ENST00000476560 767 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AC079080.1-201ENST00000479841 822 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AL121594.2-201ENST00000541658 472 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 CIR1P2-201ENST00000514821 1342 ntBASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CLIP2Q9UDT6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 MIR133A2-201ENST00000347538 102 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 MIR130A-201ENST00000385274 89 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AL391422.1-201ENST00000402155 436 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AL158827.1-201ENST00000416300 391 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 GTF3AP1-201ENST00000416942 1004 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AL133173.1-201ENST00000423458 397 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 LDHBP2-201ENST00000456969 1005 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 RPS23P2-201ENST00000463671 415 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 RPS26P39-201ENST00000469206 341 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC111000.6-201ENST00000514471 709 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC126615.2-201ENST00000553003 515 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC007225.2-201ENST00000562529 256 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AP000864.1-201ENST00000609424 650 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 AC079395.2-201ENST00000610982 737 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 MIR6826-201ENST00000617808 98 ntBASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CLIP2Q9UDT6 RARSP1-201ENST00000542842 1418 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms