Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 HMGN2P36-201ENST00000529541 409 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 NANOGNBP2-201ENST00000544753 553 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 COX6CP7-201ENST00000597056 208 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC005014.3-201ENST00000605985 190 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 MIR6778-201ENST00000617912 73 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AL359742.1-201ENST00000622497 540 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 OR8G3P-202ENST00000641572 1255 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC022417.1-201ENST00000624768 1303 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC083837.1-201ENST00000565297 2994 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC007938.2-201ENST00000604666 2634 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 ADAM24P-201ENST00000398655 2101 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 RNA5SP326-201ENST00000363209 110 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC005042.1-201ENST00000393397 800 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 HMGN1P20-201ENST00000411849 300 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 NIFKP3-201ENST00000417799 865 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 DPPA2P2-201ENST00000418220 897 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 TMEM183AP1-205ENST00000432739 290 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC094085.1-201ENST00000468914 584 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 RPL37AP8-201ENST00000494116 276 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC139365.2-201ENST00000517972 253 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 IGLV3-30-201ENST00000524362 298 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 OR4A17P-201ENST00000526032 904 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC096996.1-201ENST00000563813 325 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 NDUFA5P11-201ENST00000567995 343 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 LSM1P2-201ENST00000604911 322 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 RPL21P136-201ENST00000605378 396 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AL365181.4-201ENST00000609800 547 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 TET1P1-201ENST00000426627 2301 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 OR4F13P-202ENST00000560066 2054 ntBASIC5.86□□□□□ -1.47
PCDH9Q9HC56 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH9Q9HC56 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC006206.1-201ENST00000544842 3387 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 AC023490.2-201ENST00000359859 470 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH9Q9HC56 SNORA40.4-201ENST00000390971 128 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 LYPLA1P3-201ENST00000402650 695 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.85□□□□□ -1.47
PCDH9Q9HC56 SNORA11.5-201ENST00000408163 128 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms