Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SUGT1P2-201ENST00000379452 992 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SNORA17A-201ENST00000391185 133 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 GPS2P1-201ENST00000411761 986 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 Z93019.1-201ENST00000416450 973 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 CHEK2P5-201ENST00000423877 246 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 RPL31P15-201ENST00000449770 338 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AZGP1P2-201ENST00000454506 345 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 ACA64.1-201ENST00000459171 127 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 RPS3AP15-201ENST00000483874 781 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC114781.3-201ENST00000512083 142 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 NANOGNBP2-201ENST00000544753 553 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 HMGN2P47-201ENST00000559378 272 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC010632.3-201ENST00000611377 369 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SNORA17.5-201ENST00000630429 132 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 MT-RNR2-201ENST00000387347 1559 ntBASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AP001029.2-203ENST00000589795 4910 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AL359715.3-201ENST00000569267 2123 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AC007842.1-201ENST00000597336 2039 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SNORA64.1-201ENST00000362600 132 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AL031985.1-201ENST00000392713 418 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 MARK2P12-201ENST00000420129 585 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 HMGB3P24-201ENST00000433260 622 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AC110749.1-201ENST00000462007 357 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 MIR7853-201ENST00000584820 132 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AC008536.1-201ENST00000602872 669 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 AC013244.1-201ENST00000604279 193 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 FO681491.1-202ENST00000623392 737 ntBASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRTM1Q9HBL6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 NEPNP-201ENST00000404786 1371 ntBASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.34□□□□□ -1.55
LRTM1Q9HBL6 SNORA5.1-201ENST00000384275 131 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms