Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SUMO2P15-201ENST00000604285 278 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 RN7SL787P-201ENST00000613000 284 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC090607.5-201ENST00000615692 224 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 MIR6133-201ENST00000617057 108 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 OR8G3P-202ENST00000641572 1255 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 SAMM50P1-201ENST00000455403 1399 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 OR4F13P-202ENST00000560066 2054 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 SNORA58B-201ENST00000364259 136 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AK4P4-201ENST00000419465 646 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 HMGB3P24-201ENST00000433260 622 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 LINC02210-201ENST00000444561 288 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AL445665.1-202ENST00000452436 324 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 YWHAEP1-201ENST00000453697 763 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AP000648.1-201ENST00000529682 397 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AC009962.1-201ENST00000567327 3813 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AC092121.1-201ENST00000569452 202 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AL031601.1-201ENST00000605702 394 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UPF3BQ9BZI7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 SNORA70.6-201ENST00000383934 134 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 OR3A2-201ENST00000408891 1076 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AL133482.1-201ENST00000415988 498 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AL035660.1-201ENST00000422041 222 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 NANOGP9-201ENST00000439890 892 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC023271.1-201ENST00000445936 1090 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 SNORD125-201ENST00000459538 96 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 COX6CP7-201ENST00000597056 208 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AP000864.1-201ENST00000609424 650 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AP005431.1-201ENST00000618479 319 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 NEPNP-201ENST00000404786 1371 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 ABCC13-202ENST00000463099 3842 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 ADAM24P-201ENST00000398655 2101 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 BCORP1-203ENST00000513194 5093 ntBASIC6.67□□□□□ -1.34
UPF3BQ9BZI7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 U3.28-201ENST00000391249 210 ntBASIC6.66□□□□□ -1.34
UPF3BQ9BZI7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms